Top 10 genes with highest correlation to Rv2061c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3525c/- | (cc=0.5587) | info on Rv3525c/- |
| Rv1947/- | (cc=0.4683) | info on Rv1947/- |
| Rv3191c/- | (cc=0.4672) | info on Rv3191c/- |
| Rv1365c/rsfA | (cc=0.4642) | info on Rv1365c/rsfA |
| Rv0456B/mazE1 | (cc=0.4442) | info on Rv0456B/mazE1 |
| Rv0868c/moaD2 | (cc=0.4368) | info on Rv0868c/moaD2 |
| Rv0582/vapC26 | (cc=0.434) | info on Rv0582/vapC26 |
| Rv0388c/PPE9 | (cc=0.4214) | info on Rv0388c/PPE9 |
| Rv2262c/- | (cc=0.4183) | info on Rv2262c/- |
| Rv1857/modA | (cc=0.4079) | info on Rv1857/modA |
Correlation of Rv2061c/- with Rv1365c/rsfA
Normalized LFCs for Rv2061c/-:
(description and provenance of datasets)
| Rv2061c/- | Rv1365c/rsfA | |
| Fe_supp_jason_reseq | -0.24 | 0.415 |
| low_pH_jason_reseq | 1.166 | -0.022 |
| NO_jason_reseq | 0.021 | -1.57 |
| B6_jason_reseq | 0.145 | 0.269 |
| MHCII_jason_reseq | 0.051 | -0.315 |
| Isoniazid02 | -2.865 | -0.968 |
| Rifampicin4 | 0.463 | 0.623 |
| Ethambutol3 | -2.36 | -0.809 |
| Meropenem3 | -1.973 | -0.996 |
| Vancomycin16 | -0.87 | -0.422 |
| Rv2680_day32 | 0.067 | 0.526 |
| H37Rv_KO_MarP | 0.838 | 0.474 |
| hypoxia_3wks | -0.088 | 0.562 |
| hypoxia_6wks | 0.069 | 0.173 |
| glycerol | -0.685 | 0.492 |
| cholesterol | -0.847 | 0.559 |
| AJ | -0.087 | -0.583 |
| Bibs02 | 1.325 | 0.546 |
| Bibs02c | 0.887 | 2.099 |
| BL6 | -0.542 | 1.781 |
| BL6a | 0.97 | 1.759 |
| BXD01 | -0.037 | 0.977 |
| BXD010 | 0.502 | 1.214 |
| BXD011 | 0.229 | 1.783 |
| BXD03 | -0.423 | 0.909 |
| BXD04 | 0.935 | 1.551 |
| BXD05 | 0.21 | 0.982 |
| BXD06 | 0.759 | 1.132 |
| BXD07 | 0.147 | 1.649 |
| BXD08 | 0.452 | 1.453 |
| BXD09 | 0.37 | 1.469 |
| CAST | -0.721 | 0.522 |
| CCcont | -0.626 | 0.434 |
| DS01 | 1.073 | 0.944 |
| DS02 | 0.176 | 1.705 |
| DS04 | 0.333 | 2.689 |
| DS0c | -0.652 | 0.211 |
| GP01 | -1.547 | -1.344 |
| GP02 | -1.873 | 0.189 |
| GP0c | -2.341 | -1.286 |
| NOD | -1.103 | -0.291 |
| NZO | -0.075 | -0.449 |
| PWK | 0.627 | -0.651 |
| H37Rv_KO_CtpC | 0.758 | 0.672 |
| H37Rv_KO_CtpD | -1.788 | -0.351 |
| H37Rv_KO_Rv1272 | 0.833 | -0.183 |
| H37Rv_KO_SugABC | 0.009 | -1.06 |
| H37Rv_KO_MbtN | 1.646 | 0.164 |
| Trans05 | 0.314 | 0.138 |
| macrophage_unactivated | 0.455 | 1.367 |
| IL1 | 1.711 | 0.786 |
| Rapamycin | 0.408 | 0.859 |
| Tcell | 0.736 | 0.459 |
| GMCSF | 1.201 | 0.987 |
| IFNab | 0.402 | 1.061 |
| IFNg | 0.861 | 0.588 |
| IFNg_GMCSF1 | 1.562 | 1.832 |
| Rv1432_day32 | -0.597 | 0.591 |
| Rv1565c_day32 | -0.494 | -0.286 |
| secA2_input | -1.061 | 0.221 |
| delta_Rv3594 | -0.722 | 0.422 |
| delta_Rv3717 | -1.058 | 0.581 |
| delta_Rv3811 | -1.419 | 0.714 |
| delta_Rv0954 | -1.026 | 0.778 |
| PonA1 | -0.372 | 0.779 |
| EccD1_KO | -0.891 | 0.842 |
| EspI_KO | -0.499 | -0.297 |
| PE35_KO | -1.234 | 0.254 |
| PPE68_KO | -1.789 | 0.966 |
| glycerol2 | -0.056 | -1.079 |
| lignocerate | -0.761 | -1.143 |
| oleate | 0.926 | -0.034 |
| phosphatidylcholine | 0.459 | -0.57 |
| acetate | 0.281 | -1.44 |
| glucAc | -2.954 | -1.679 |
| Rv0950ko | -1.306 | -2.035 |
| Rv1096ko | -0.464 | -0.44 |
| Rv3684ko | 0.481 | -0.203 |
| delta_otsA_trehalose | -0.053 | 0.0 |