Top 10 genes with highest correlation to Rv2061c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3525c/- | (cc=0.5587) | info on Rv3525c/- |
| Rv1947/- | (cc=0.4683) | info on Rv1947/- |
| Rv3191c/- | (cc=0.4672) | info on Rv3191c/- |
| Rv1365c/rsfA | (cc=0.4642) | info on Rv1365c/rsfA |
| Rv0456B/mazE1 | (cc=0.4442) | info on Rv0456B/mazE1 |
| Rv0868c/moaD2 | (cc=0.4368) | info on Rv0868c/moaD2 |
| Rv0582/vapC26 | (cc=0.434) | info on Rv0582/vapC26 |
| Rv0388c/PPE9 | (cc=0.4214) | info on Rv0388c/PPE9 |
| Rv2262c/- | (cc=0.4183) | info on Rv2262c/- |
| Rv1857/modA | (cc=0.4079) | info on Rv1857/modA |
Correlation of Rv2061c/- with Rv0388c/PPE9
Normalized LFCs for Rv2061c/-:
(description and provenance of datasets)
| Rv2061c/- | Rv0388c/PPE9 | |
| Fe_supp_jason_reseq | -0.24 | -0.923 |
| low_pH_jason_reseq | 1.166 | -0.979 |
| NO_jason_reseq | 0.021 | -0.486 |
| B6_jason_reseq | 0.145 | -0.156 |
| MHCII_jason_reseq | 0.051 | -0.299 |
| Isoniazid02 | -2.865 | 0.02 |
| Rifampicin4 | 0.463 | 0.717 |
| Ethambutol3 | -2.36 | -0.086 |
| Meropenem3 | -1.973 | 0.332 |
| Vancomycin16 | -0.87 | -0.151 |
| Rv2680_day32 | 0.067 | -2.472 |
| H37Rv_KO_MarP | 0.838 | -0.072 |
| hypoxia_3wks | -0.088 | -0.355 |
| hypoxia_6wks | 0.069 | -0.679 |
| glycerol | -0.685 | -0.762 |
| cholesterol | -0.847 | 0.03 |
| AJ | -0.087 | 1.055 |
| Bibs02 | 1.325 | 0.918 |
| Bibs02c | 0.887 | 0.694 |
| BL6 | -0.542 | -0.721 |
| BL6a | 0.97 | 0.0 |
| BXD01 | -0.037 | 0.704 |
| BXD010 | 0.502 | 0.385 |
| BXD011 | 0.229 | 0.982 |
| BXD03 | -0.423 | 0.083 |
| BXD04 | 0.935 | -0.026 |
| BXD05 | 0.21 | 0.902 |
| BXD06 | 0.759 | -0.133 |
| BXD07 | 0.147 | 0.279 |
| BXD08 | 0.452 | 0.41 |
| BXD09 | 0.37 | 0.233 |
| CAST | -0.721 | 0.711 |
| CCcont | -0.626 | -0.167 |
| DS01 | 1.073 | 1.009 |
| DS02 | 0.176 | 1.457 |
| DS04 | 0.333 | 1.279 |
| DS0c | -0.652 | 0.896 |
| GP01 | -1.547 | -0.466 |
| GP02 | -1.873 | -1.01 |
| GP0c | -2.341 | -1.716 |
| NOD | -1.103 | 2.372 |
| NZO | -0.075 | 0.961 |
| PWK | 0.627 | 0.307 |
| H37Rv_KO_CtpC | 0.758 | 1.467 |
| H37Rv_KO_CtpD | -1.788 | -0.171 |
| H37Rv_KO_Rv1272 | 0.833 | 0.905 |
| H37Rv_KO_SugABC | 0.009 | 1.027 |
| H37Rv_KO_MbtN | 1.646 | 0.557 |
| Trans05 | 0.314 | 0.762 |
| macrophage_unactivated | 0.455 | 0.527 |
| IL1 | 1.711 | 2.002 |
| Rapamycin | 0.408 | 1.82 |
| Tcell | 0.736 | 0.691 |
| GMCSF | 1.201 | 1.196 |
| IFNab | 0.402 | 1.611 |
| IFNg | 0.861 | 0.505 |
| IFNg_GMCSF1 | 1.562 | 0.996 |
| Rv1432_day32 | -0.597 | 0.343 |
| Rv1565c_day32 | -0.494 | 0.0 |
| secA2_input | -1.061 | 0.28 |
| delta_Rv3594 | -0.722 | -1.077 |
| delta_Rv3717 | -1.058 | -2.451 |
| delta_Rv3811 | -1.419 | -1.142 |
| delta_Rv0954 | -1.026 | -0.09 |
| PonA1 | -0.372 | -0.77 |
| EccD1_KO | -0.891 | -0.184 |
| EspI_KO | -0.499 | 0.419 |
| PE35_KO | -1.234 | -0.478 |
| PPE68_KO | -1.789 | -0.899 |
| glycerol2 | -0.056 | -1.135 |
| lignocerate | -0.761 | -0.84 |
| oleate | 0.926 | -0.133 |
| phosphatidylcholine | 0.459 | -0.535 |
| acetate | 0.281 | -0.306 |
| glucAc | -2.954 | -1.076 |
| Rv0950ko | -1.306 | 0.639 |
| Rv1096ko | -0.464 | 0.73 |
| Rv3684ko | 0.481 | 0.891 |
| delta_otsA_trehalose | -0.053 | -0.356 |