Top 10 genes with highest correlation to Rv2061c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3525c/- | (cc=0.5587) | info on Rv3525c/- |
| Rv1947/- | (cc=0.4683) | info on Rv1947/- |
| Rv3191c/- | (cc=0.4672) | info on Rv3191c/- |
| Rv1365c/rsfA | (cc=0.4642) | info on Rv1365c/rsfA |
| Rv0456B/mazE1 | (cc=0.4442) | info on Rv0456B/mazE1 |
| Rv0868c/moaD2 | (cc=0.4368) | info on Rv0868c/moaD2 |
| Rv0582/vapC26 | (cc=0.434) | info on Rv0582/vapC26 |
| Rv0388c/PPE9 | (cc=0.4214) | info on Rv0388c/PPE9 |
| Rv2262c/- | (cc=0.4183) | info on Rv2262c/- |
| Rv1857/modA | (cc=0.4079) | info on Rv1857/modA |
Correlation of Rv2061c/- with Rv0582/vapC26
Normalized LFCs for Rv2061c/-:
(description and provenance of datasets)
| Rv2061c/- | Rv0582/vapC26 | |
| Fe_supp_jason_reseq | -0.24 | 2.352 |
| low_pH_jason_reseq | 1.166 | 1.017 |
| NO_jason_reseq | 0.021 | 2.344 |
| B6_jason_reseq | 0.145 | 0.28 |
| MHCII_jason_reseq | 0.051 | -0.912 |
| Isoniazid02 | -2.865 | -3.271 |
| Rifampicin4 | 0.463 | -1.481 |
| Ethambutol3 | -2.36 | -2.601 |
| Meropenem3 | -1.973 | -2.562 |
| Vancomycin16 | -0.87 | -1.838 |
| Rv2680_day32 | 0.067 | 0.33 |
| H37Rv_KO_MarP | 0.838 | -0.037 |
| hypoxia_3wks | -0.088 | 1.18 |
| hypoxia_6wks | 0.069 | -0.276 |
| glycerol | -0.685 | -0.813 |
| cholesterol | -0.847 | -0.773 |
| AJ | -0.087 | -0.15 |
| Bibs02 | 1.325 | -1.249 |
| Bibs02c | 0.887 | 0.705 |
| BL6 | -0.542 | -1.198 |
| BL6a | 0.97 | -0.218 |
| BXD01 | -0.037 | 0.079 |
| BXD010 | 0.502 | -1.295 |
| BXD011 | 0.229 | -0.513 |
| BXD03 | -0.423 | -0.087 |
| BXD04 | 0.935 | -1.003 |
| BXD05 | 0.21 | -0.628 |
| BXD06 | 0.759 | -0.42 |
| BXD07 | 0.147 | -0.946 |
| BXD08 | 0.452 | 0.738 |
| BXD09 | 0.37 | -0.403 |
| CAST | -0.721 | 0.556 |
| CCcont | -0.626 | -1.43 |
| DS01 | 1.073 | -0.05 |
| DS02 | 0.176 | -2.451 |
| DS04 | 0.333 | 0.156 |
| DS0c | -0.652 | 0.487 |
| GP01 | -1.547 | -0.021 |
| GP02 | -1.873 | -1.171 |
| GP0c | -2.341 | -0.888 |
| NOD | -1.103 | -1.362 |
| NZO | -0.075 | -0.413 |
| PWK | 0.627 | 0.631 |
| H37Rv_KO_CtpC | 0.758 | 0.88 |
| H37Rv_KO_CtpD | -1.788 | 0.918 |
| H37Rv_KO_Rv1272 | 0.833 | 0.914 |
| H37Rv_KO_SugABC | 0.009 | -0.021 |
| H37Rv_KO_MbtN | 1.646 | -0.791 |
| Trans05 | 0.314 | 1.326 |
| macrophage_unactivated | 0.455 | 0.675 |
| IL1 | 1.711 | 0.483 |
| Rapamycin | 0.408 | 0.807 |
| Tcell | 0.736 | 1.58 |
| GMCSF | 1.201 | -0.156 |
| IFNab | 0.402 | 1.212 |
| IFNg | 0.861 | 0.436 |
| IFNg_GMCSF1 | 1.562 | 1.26 |
| Rv1432_day32 | -0.597 | 0.632 |
| Rv1565c_day32 | -0.494 | 0.0 |
| secA2_input | -1.061 | 1.702 |
| delta_Rv3594 | -0.722 | 0.233 |
| delta_Rv3717 | -1.058 | 0.522 |
| delta_Rv3811 | -1.419 | 0.138 |
| delta_Rv0954 | -1.026 | 0.85 |
| PonA1 | -0.372 | 0.073 |
| EccD1_KO | -0.891 | -1.868 |
| EspI_KO | -0.499 | -1.694 |
| PE35_KO | -1.234 | -1.161 |
| PPE68_KO | -1.789 | -1.059 |
| glycerol2 | -0.056 | -0.598 |
| lignocerate | -0.761 | -1.588 |
| oleate | 0.926 | 0.328 |
| phosphatidylcholine | 0.459 | -0.366 |
| acetate | 0.281 | -2.12 |
| glucAc | -2.954 | -3.718 |
| Rv0950ko | -1.306 | -0.434 |
| Rv1096ko | -0.464 | 1.095 |
| Rv3684ko | 0.481 | 0.917 |
| delta_otsA_trehalose | -0.053 | 0.549 |