TnSeqCorr

Top 10 genes with highest correlation to Rv2034/-:

update plotcorrelationlink to info on gene
Rv0628c/- (cc=0.4255) info on Rv0628c/-
Rv1457c/- (cc=0.4236) info on Rv1457c/-
Rv2965c/kdtB (cc=0.4164) info on Rv2965c/kdtB
Rv3456c/rplQ (cc=0.4074) info on Rv3456c/rplQ
Rv0651/rplJ (cc=0.4066) info on Rv0651/rplJ
Rv0812/- (cc=0.3873) info on Rv0812/-
Rv2609c/- (cc=0.3773) info on Rv2609c/-
Rv0681/- (cc=0.3751) info on Rv0681/-
Rv1636/TB15.3 (cc=0.371) info on Rv1636/TB15.3
Rv0791c/- (cc=0.3666) info on Rv0791c/-

Correlation of Rv2034/- with Rv2609c/-

Normalized LFCs for Rv2034/-:
(description and provenance of datasets)
Rv2034/-Rv2609c/-
Fe_supp_jason_reseq

0.38

-0.786

low_pH_jason_reseq

-0.925

-1.128

NO_jason_reseq

1.536

0.428

B6_jason_reseq

-0.723

-1.798

MHCII_jason_reseq

-1.112

-2.104

Isoniazid02

0.311

0.966

Rifampicin4

1.424

-0.847

Ethambutol3

-0.146

4.244

Meropenem3

0.426

-1.412

Vancomycin16

0.0

-0.101

Rv2680_day32

0.0

-3.538

H37Rv_KO_MarP

3.236

0.26

hypoxia_3wks

-0.195

-3.561

hypoxia_6wks

-0.933

-1.428

glycerol

-0.976

-0.07

cholesterol

-1.504

-3.14

AJ

-1.593

-3.35

Bibs02

0.751

-0.991

Bibs02c

-2.172

-2.302

BL6

0.725

-1.229

BL6a

0.0

-2.477

BXD01

-0.8

-1.649

BXD010

-1.329

-1.622

BXD011

-0.272

-1.116

BXD03

1.5

-2.179

BXD04

-0.048

-1.762

BXD05

1.87

-2.109

BXD06

0.05

-1.98

BXD07

-1.174

-1.896

BXD08

0.236

-1.774

BXD09

0.422

-2.434

CAST

0.0

-2.993

CCcont

1.193

-0.859

DS01

1.571

-1.865

DS02

0.893

-1.482

DS04

2.753

-1.552

DS0c

-0.174

-1.876

GP01

-1.025

-1.844

GP02

-0.864

-2.375

GP0c

-1.35

-1.711

NOD

0.399

-1.429

NZO

-1.691

-3.125

PWK

-0.948

-3.5

H37Rv_KO_CtpC

0.625

-2.476

H37Rv_KO_CtpD

0.452

-0.806

H37Rv_KO_Rv1272

-1.464

-0.975

H37Rv_KO_SugABC

-0.756

-1.254

H37Rv_KO_MbtN

-0.967

-0.762

Trans05

1.282

-0.928

macrophage_unactivated

-1.398

-0.057

IL1

1.13

0.789

Rapamycin

2.296

0.479

Tcell

0.661

1.153

GMCSF

0.776

-0.628

IFNab

2.5

-0.919

IFNg

0.604

-1.125

IFNg_GMCSF1

-1.163

0.383

Rv1432_day32

0.0

-2.203

Rv1565c_day32

0.0

-1.346

secA2_input

5.28

0.83

delta_Rv3594

2.885

2.356

delta_Rv3717

2.146

1.549

delta_Rv3811

1.392

1.706

delta_Rv0954

-0.357

0.129

PonA1

-0.233

0.067

EccD1_KO

2.773

-1.885

EspI_KO

0.0

-1.338

PE35_KO

-2.234

-0.648

PPE68_KO

-0.426

-1.139

glycerol2

0.0

-0.884

lignocerate

1.128

-0.58

oleate

0.0

-3.424

phosphatidylcholine

0.193

-0.368

acetate

1.998

0.904

glucAc

1.638

0.743

Rv0950ko

1.276

0.567

Rv1096ko

1.342

-0.697

Rv3684ko

-1.261

0.458

delta_otsA_trehalose

0.0

-0.783