Top 10 genes with highest correlation to Rv2034/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0628c/- | (cc=0.4255) | info on Rv0628c/- |
Rv1457c/- | (cc=0.4236) | info on Rv1457c/- |
Rv2965c/kdtB | (cc=0.4164) | info on Rv2965c/kdtB |
Rv3456c/rplQ | (cc=0.4074) | info on Rv3456c/rplQ |
Rv0651/rplJ | (cc=0.4066) | info on Rv0651/rplJ |
Rv0812/- | (cc=0.3873) | info on Rv0812/- |
Rv2609c/- | (cc=0.3773) | info on Rv2609c/- |
Rv0681/- | (cc=0.3751) | info on Rv0681/- |
Rv1636/TB15.3 | (cc=0.371) | info on Rv1636/TB15.3 |
Rv0791c/- | (cc=0.3666) | info on Rv0791c/- |
Correlation of Rv2034/- with Rv2609c/-
Normalized LFCs for Rv2034/-:
(description and provenance of datasets)
Rv2034/- | Rv2609c/- | |
Fe_supp_jason_reseq | 0.38 | -0.786 |
low_pH_jason_reseq | -0.925 | -1.128 |
NO_jason_reseq | 1.536 | 0.428 |
B6_jason_reseq | -0.723 | -1.798 |
MHCII_jason_reseq | -1.112 | -2.104 |
Isoniazid02 | 0.311 | 0.966 |
Rifampicin4 | 1.424 | -0.847 |
Ethambutol3 | -0.146 | 4.244 |
Meropenem3 | 0.426 | -1.412 |
Vancomycin16 | 0.0 | -0.101 |
Rv2680_day32 | 0.0 | -3.538 |
H37Rv_KO_MarP | 3.236 | 0.26 |
hypoxia_3wks | -0.195 | -3.561 |
hypoxia_6wks | -0.933 | -1.428 |
glycerol | -0.976 | -0.07 |
cholesterol | -1.504 | -3.14 |
AJ | -1.593 | -3.35 |
Bibs02 | 0.751 | -0.991 |
Bibs02c | -2.172 | -2.302 |
BL6 | 0.725 | -1.229 |
BL6a | 0.0 | -2.477 |
BXD01 | -0.8 | -1.649 |
BXD010 | -1.329 | -1.622 |
BXD011 | -0.272 | -1.116 |
BXD03 | 1.5 | -2.179 |
BXD04 | -0.048 | -1.762 |
BXD05 | 1.87 | -2.109 |
BXD06 | 0.05 | -1.98 |
BXD07 | -1.174 | -1.896 |
BXD08 | 0.236 | -1.774 |
BXD09 | 0.422 | -2.434 |
CAST | 0.0 | -2.993 |
CCcont | 1.193 | -0.859 |
DS01 | 1.571 | -1.865 |
DS02 | 0.893 | -1.482 |
DS04 | 2.753 | -1.552 |
DS0c | -0.174 | -1.876 |
GP01 | -1.025 | -1.844 |
GP02 | -0.864 | -2.375 |
GP0c | -1.35 | -1.711 |
NOD | 0.399 | -1.429 |
NZO | -1.691 | -3.125 |
PWK | -0.948 | -3.5 |
H37Rv_KO_CtpC | 0.625 | -2.476 |
H37Rv_KO_CtpD | 0.452 | -0.806 |
H37Rv_KO_Rv1272 | -1.464 | -0.975 |
H37Rv_KO_SugABC | -0.756 | -1.254 |
H37Rv_KO_MbtN | -0.967 | -0.762 |
Trans05 | 1.282 | -0.928 |
macrophage_unactivated | -1.398 | -0.057 |
IL1 | 1.13 | 0.789 |
Rapamycin | 2.296 | 0.479 |
Tcell | 0.661 | 1.153 |
GMCSF | 0.776 | -0.628 |
IFNab | 2.5 | -0.919 |
IFNg | 0.604 | -1.125 |
IFNg_GMCSF1 | -1.163 | 0.383 |
Rv1432_day32 | 0.0 | -2.203 |
Rv1565c_day32 | 0.0 | -1.346 |
secA2_input | 5.28 | 0.83 |
delta_Rv3594 | 2.885 | 2.356 |
delta_Rv3717 | 2.146 | 1.549 |
delta_Rv3811 | 1.392 | 1.706 |
delta_Rv0954 | -0.357 | 0.129 |
PonA1 | -0.233 | 0.067 |
EccD1_KO | 2.773 | -1.885 |
EspI_KO | 0.0 | -1.338 |
PE35_KO | -2.234 | -0.648 |
PPE68_KO | -0.426 | -1.139 |
glycerol2 | 0.0 | -0.884 |
lignocerate | 1.128 | -0.58 |
oleate | 0.0 | -3.424 |
phosphatidylcholine | 0.193 | -0.368 |
acetate | 1.998 | 0.904 |
glucAc | 1.638 | 0.743 |
Rv0950ko | 1.276 | 0.567 |
Rv1096ko | 1.342 | -0.697 |
Rv3684ko | -1.261 | 0.458 |
delta_otsA_trehalose | 0.0 | -0.783 |