Top 10 genes with highest correlation to Rv2034/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0628c/- | (cc=0.4255) | info on Rv0628c/- |
| Rv1457c/- | (cc=0.4236) | info on Rv1457c/- |
| Rv2965c/kdtB | (cc=0.4164) | info on Rv2965c/kdtB |
| Rv3456c/rplQ | (cc=0.4074) | info on Rv3456c/rplQ |
| Rv0651/rplJ | (cc=0.4066) | info on Rv0651/rplJ |
| Rv0812/- | (cc=0.3873) | info on Rv0812/- |
| Rv2609c/- | (cc=0.3773) | info on Rv2609c/- |
| Rv0681/- | (cc=0.3751) | info on Rv0681/- |
| Rv1636/TB15.3 | (cc=0.371) | info on Rv1636/TB15.3 |
| Rv0791c/- | (cc=0.3666) | info on Rv0791c/- |
Correlation of Rv2034/- with Rv0681/-
Normalized LFCs for Rv2034/-:
(description and provenance of datasets)
| Rv2034/- | Rv0681/- | |
| Fe_supp_jason_reseq | 0.38 | 0.229 |
| low_pH_jason_reseq | -0.925 | 1.236 |
| NO_jason_reseq | 1.536 | -0.221 |
| B6_jason_reseq | -0.723 | -0.529 |
| MHCII_jason_reseq | -1.112 | -0.412 |
| Isoniazid02 | 0.311 | -0.831 |
| Rifampicin4 | 1.424 | -0.471 |
| Ethambutol3 | -0.146 | 0.623 |
| Meropenem3 | 0.426 | 0.05 |
| Vancomycin16 | 0.0 | -0.868 |
| Rv2680_day32 | 0.0 | -0.641 |
| H37Rv_KO_MarP | 3.236 | 0.988 |
| hypoxia_3wks | -0.195 | -1.595 |
| hypoxia_6wks | -0.933 | -1.23 |
| glycerol | -0.976 | -0.821 |
| cholesterol | -1.504 | -0.444 |
| AJ | -1.593 | -1.003 |
| Bibs02 | 0.751 | -0.317 |
| Bibs02c | -2.172 | -0.305 |
| BL6 | 0.725 | -0.108 |
| BL6a | 0.0 | -0.096 |
| BXD01 | -0.8 | -0.42 |
| BXD010 | -1.329 | -0.23 |
| BXD011 | -0.272 | -0.683 |
| BXD03 | 1.5 | -0.821 |
| BXD04 | -0.048 | -1.043 |
| BXD05 | 1.87 | 0.253 |
| BXD06 | 0.05 | -0.453 |
| BXD07 | -1.174 | -0.886 |
| BXD08 | 0.236 | -0.529 |
| BXD09 | 0.422 | -0.839 |
| CAST | 0.0 | 0.08 |
| CCcont | 1.193 | 0.151 |
| DS01 | 1.571 | 0.731 |
| DS02 | 0.893 | -0.961 |
| DS04 | 2.753 | 1.162 |
| DS0c | -0.174 | 0.594 |
| GP01 | -1.025 | -1.436 |
| GP02 | -0.864 | 0.061 |
| GP0c | -1.35 | -1.185 |
| NOD | 0.399 | -0.602 |
| NZO | -1.691 | -1.108 |
| PWK | -0.948 | -0.713 |
| H37Rv_KO_CtpC | 0.625 | -0.604 |
| H37Rv_KO_CtpD | 0.452 | 0.667 |
| H37Rv_KO_Rv1272 | -1.464 | -0.284 |
| H37Rv_KO_SugABC | -0.756 | 0.311 |
| H37Rv_KO_MbtN | -0.967 | 0.359 |
| Trans05 | 1.282 | 0.082 |
| macrophage_unactivated | -1.398 | 0.619 |
| IL1 | 1.13 | -0.673 |
| Rapamycin | 2.296 | -0.153 |
| Tcell | 0.661 | 0.844 |
| GMCSF | 0.776 | 0.602 |
| IFNab | 2.5 | 1.113 |
| IFNg | 0.604 | -0.273 |
| IFNg_GMCSF1 | -1.163 | -0.28 |
| Rv1432_day32 | 0.0 | -0.634 |
| Rv1565c_day32 | 0.0 | -1.7 |
| secA2_input | 5.28 | 0.949 |
| delta_Rv3594 | 2.885 | -0.229 |
| delta_Rv3717 | 2.146 | -1.433 |
| delta_Rv3811 | 1.392 | -0.598 |
| delta_Rv0954 | -0.357 | 0.252 |
| PonA1 | -0.233 | 1.11 |
| EccD1_KO | 2.773 | 1.026 |
| EspI_KO | 0.0 | 0.799 |
| PE35_KO | -2.234 | -0.207 |
| PPE68_KO | -0.426 | -0.33 |
| glycerol2 | 0.0 | -0.286 |
| lignocerate | 1.128 | 0.181 |
| oleate | 0.0 | -1.109 |
| phosphatidylcholine | 0.193 | -0.129 |
| acetate | 1.998 | 0.377 |
| glucAc | 1.638 | 0.225 |
| Rv0950ko | 1.276 | -0.139 |
| Rv1096ko | 1.342 | -0.208 |
| Rv3684ko | -1.261 | -0.891 |
| delta_otsA_trehalose | 0.0 | -0.385 |