Top 10 genes with highest correlation to Rv2030c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2031c/hspX | (cc=0.821) | info on Rv2031c/hspX |
Rv1070c/echA8 | (cc=0.6076) | info on Rv1070c/echA8 |
Rv0344c/lpqJ | (cc=0.6014) | info on Rv0344c/lpqJ |
Rv1735c/- | (cc=0.5788) | info on Rv1735c/- |
Rv2006/otsB1 | (cc=0.5779) | info on Rv2006/otsB1 |
Rv1182/papA3 | (cc=0.5774) | info on Rv1182/papA3 |
Rv0089/- | (cc=0.5762) | info on Rv0089/- |
Rv3607c/folB | (cc=0.5635) | info on Rv3607c/folB |
Rv1894c/- | (cc=0.5563) | info on Rv1894c/- |
Rv2490c/PE_PGRS43 | (cc=0.5562) | info on Rv2490c/PE_PGRS43 |
Correlation of Rv2030c/- with Rv1735c/-
Normalized LFCs for Rv2030c/-:
(description and provenance of datasets)
Rv2030c/- | Rv1735c/- | |
Fe_supp_jason_reseq | -1.103 | -1.307 |
low_pH_jason_reseq | 0.132 | -0.656 |
NO_jason_reseq | 0.664 | 0.118 |
B6_jason_reseq | -0.389 | -1.084 |
MHCII_jason_reseq | 0.92 | 0.265 |
Isoniazid02 | 0.087 | 1.275 |
Rifampicin4 | 0.0 | 0.501 |
Ethambutol3 | 0.229 | 0.916 |
Meropenem3 | 0.244 | 0.264 |
Vancomycin16 | -0.069 | 0.716 |
Rv2680_day32 | -0.184 | 0.0 |
H37Rv_KO_MarP | -0.018 | 0.559 |
hypoxia_3wks | -3.007 | 0.578 |
hypoxia_6wks | -3.721 | -1.825 |
glycerol | -0.13 | -1.444 |
cholesterol | -0.325 | -1.572 |
AJ | -0.501 | 0.104 |
Bibs02 | 0.338 | -0.66 |
Bibs02c | -0.364 | -0.571 |
BL6 | -1.545 | -2.2 |
BL6a | -0.881 | -2.426 |
BXD01 | -1.203 | -1.284 |
BXD010 | -0.875 | -2.074 |
BXD011 | -1.288 | -1.905 |
BXD03 | -2.275 | -1.656 |
BXD04 | -1.251 | 0.0 |
BXD05 | -1.693 | -1.264 |
BXD06 | -1.451 | -2.221 |
BXD07 | -1.561 | -2.304 |
BXD08 | -0.695 | -0.976 |
BXD09 | -1.768 | -1.64 |
CAST | -0.439 | 0.337 |
CCcont | -2.411 | -2.554 |
DS01 | -0.489 | -0.703 |
DS02 | -1.038 | 0.928 |
DS04 | -0.402 | 1.665 |
DS0c | 0.297 | -0.102 |
GP01 | 0.047 | 1.249 |
GP02 | -0.826 | 1.619 |
GP0c | -0.226 | -0.126 |
NOD | -0.179 | 0.347 |
NZO | -0.282 | -1.319 |
PWK | -0.492 | 0.688 |
H37Rv_KO_CtpC | -0.672 | 0.623 |
H37Rv_KO_CtpD | -2.176 | -1.945 |
H37Rv_KO_Rv1272 | 0.019 | 0.834 |
H37Rv_KO_SugABC | 0.117 | -0.844 |
H37Rv_KO_MbtN | -0.222 | -1.715 |
Trans05 | 0.38 | -0.114 |
macrophage_unactivated | -2.08 | -2.273 |
IL1 | -2.308 | -3.283 |
Rapamycin | -1.476 | -3.069 |
Tcell | -1.352 | -2.076 |
GMCSF | 0.0 | -2.778 |
IFNab | -1.66 | -3.694 |
IFNg | -1.97 | -2.536 |
IFNg_GMCSF1 | -1.405 | -2.13 |
Rv1432_day32 | 0.027 | 0.0 |
Rv1565c_day32 | -0.139 | 1.238 |
secA2_input | -1.061 | -0.429 |
delta_Rv3594 | 0.448 | -0.832 |
delta_Rv3717 | 0.641 | 0.165 |
delta_Rv3811 | 0.573 | -0.61 |
delta_Rv0954 | -0.195 | -1.499 |
PonA1 | -0.504 | 0.092 |
EccD1_KO | 0.25 | 0.793 |
EspI_KO | -0.18 | -0.394 |
PE35_KO | 0.429 | 0.435 |
PPE68_KO | 0.941 | 1.901 |
glycerol2 | 0.265 | -0.787 |
lignocerate | -0.55 | -1.162 |
oleate | 0.149 | -0.32 |
phosphatidylcholine | 0.043 | -0.56 |
acetate | -0.823 | -1.993 |
glucAc | -0.838 | -2.721 |
Rv0950ko | -0.205 | 1.001 |
Rv1096ko | 0.428 | 1.454 |
Rv3684ko | 0.563 | 1.15 |
delta_otsA_trehalose | -0.231 | 0.564 |