Top 10 genes with highest correlation to Rv2030c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2031c/hspX | (cc=0.821) | info on Rv2031c/hspX |
| Rv1070c/echA8 | (cc=0.6076) | info on Rv1070c/echA8 |
| Rv0344c/lpqJ | (cc=0.6014) | info on Rv0344c/lpqJ |
| Rv1735c/- | (cc=0.5788) | info on Rv1735c/- |
| Rv2006/otsB1 | (cc=0.5779) | info on Rv2006/otsB1 |
| Rv1182/papA3 | (cc=0.5774) | info on Rv1182/papA3 |
| Rv0089/- | (cc=0.5762) | info on Rv0089/- |
| Rv3607c/folB | (cc=0.5635) | info on Rv3607c/folB |
| Rv1894c/- | (cc=0.5563) | info on Rv1894c/- |
| Rv2490c/PE_PGRS43 | (cc=0.5562) | info on Rv2490c/PE_PGRS43 |
Correlation of Rv2030c/- with Rv0089/-
Normalized LFCs for Rv2030c/-:
(description and provenance of datasets)
| Rv2030c/- | Rv0089/- | |
| Fe_supp_jason_reseq | -1.103 | -0.617 |
| low_pH_jason_reseq | 0.132 | -0.221 |
| NO_jason_reseq | 0.664 | 0.047 |
| B6_jason_reseq | -0.389 | 0.241 |
| MHCII_jason_reseq | 0.92 | 0.487 |
| Isoniazid02 | 0.087 | 0.877 |
| Rifampicin4 | 0.0 | -0.701 |
| Ethambutol3 | 0.229 | -0.483 |
| Meropenem3 | 0.244 | -0.564 |
| Vancomycin16 | -0.069 | 0.0 |
| Rv2680_day32 | -0.184 | 1.554 |
| H37Rv_KO_MarP | -0.018 | 1.943 |
| hypoxia_3wks | -3.007 | -0.59 |
| hypoxia_6wks | -3.721 | -0.699 |
| glycerol | -0.13 | -1.188 |
| cholesterol | -0.325 | -0.61 |
| AJ | -0.501 | 0.069 |
| Bibs02 | 0.338 | 0.098 |
| Bibs02c | -0.364 | 0.0 |
| BL6 | -1.545 | -1.724 |
| BL6a | -0.881 | -1.411 |
| BXD01 | -1.203 | -1.681 |
| BXD010 | -0.875 | -1.478 |
| BXD011 | -1.288 | -1.727 |
| BXD03 | -2.275 | -1.397 |
| BXD04 | -1.251 | -0.973 |
| BXD05 | -1.693 | -1.529 |
| BXD06 | -1.451 | -1.642 |
| BXD07 | -1.561 | -2.006 |
| BXD08 | -0.695 | -2.382 |
| BXD09 | -1.768 | -1.596 |
| CAST | -0.439 | 0.492 |
| CCcont | -2.411 | -0.977 |
| DS01 | -0.489 | -0.209 |
| DS02 | -1.038 | 0.153 |
| DS04 | -0.402 | 0.462 |
| DS0c | 0.297 | 0.308 |
| GP01 | 0.047 | 0.326 |
| GP02 | -0.826 | -1.336 |
| GP0c | -0.226 | -0.489 |
| NOD | -0.179 | 0.145 |
| NZO | -0.282 | -0.1 |
| PWK | -0.492 | 0.389 |
| H37Rv_KO_CtpC | -0.672 | -1.138 |
| H37Rv_KO_CtpD | -2.176 | -3.064 |
| H37Rv_KO_Rv1272 | 0.019 | -0.742 |
| H37Rv_KO_SugABC | 0.117 | -0.481 |
| H37Rv_KO_MbtN | -0.222 | -1.571 |
| Trans05 | 0.38 | 0.008 |
| macrophage_unactivated | -2.08 | -2.727 |
| IL1 | -2.308 | -1.246 |
| Rapamycin | -1.476 | -2.071 |
| Tcell | -1.352 | -1.3 |
| GMCSF | 0.0 | -1.848 |
| IFNab | -1.66 | -2.524 |
| IFNg | -1.97 | -1.871 |
| IFNg_GMCSF1 | -1.405 | -0.936 |
| Rv1432_day32 | 0.027 | 0.301 |
| Rv1565c_day32 | -0.139 | 0.594 |
| secA2_input | -1.061 | -1.028 |
| delta_Rv3594 | 0.448 | 0.0 |
| delta_Rv3717 | 0.641 | -0.216 |
| delta_Rv3811 | 0.573 | 0.755 |
| delta_Rv0954 | -0.195 | 0.442 |
| PonA1 | -0.504 | -0.308 |
| EccD1_KO | 0.25 | -0.118 |
| EspI_KO | -0.18 | 1.221 |
| PE35_KO | 0.429 | 0.204 |
| PPE68_KO | 0.941 | 1.497 |
| glycerol2 | 0.265 | 1.494 |
| lignocerate | -0.55 | 1.736 |
| oleate | 0.149 | -0.505 |
| phosphatidylcholine | 0.043 | 1.304 |
| acetate | -0.823 | 2.168 |
| glucAc | -0.838 | 1.508 |
| Rv0950ko | -0.205 | -0.169 |
| Rv1096ko | 0.428 | 0.983 |
| Rv3684ko | 0.563 | 1.019 |
| delta_otsA_trehalose | -0.231 | 1.304 |