Top 10 genes with highest correlation to Rv2030c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2031c/hspX | (cc=0.821) | info on Rv2031c/hspX |
| Rv1070c/echA8 | (cc=0.6076) | info on Rv1070c/echA8 |
| Rv0344c/lpqJ | (cc=0.6014) | info on Rv0344c/lpqJ |
| Rv1735c/- | (cc=0.5788) | info on Rv1735c/- |
| Rv2006/otsB1 | (cc=0.5779) | info on Rv2006/otsB1 |
| Rv1182/papA3 | (cc=0.5774) | info on Rv1182/papA3 |
| Rv0089/- | (cc=0.5762) | info on Rv0089/- |
| Rv3607c/folB | (cc=0.5635) | info on Rv3607c/folB |
| Rv1894c/- | (cc=0.5563) | info on Rv1894c/- |
| Rv2490c/PE_PGRS43 | (cc=0.5562) | info on Rv2490c/PE_PGRS43 |
Correlation of Rv2030c/- with Rv2031c/hspX
Normalized LFCs for Rv2030c/-:
(description and provenance of datasets)
| Rv2030c/- | Rv2031c/hspX | |
| Fe_supp_jason_reseq | -1.103 | -1.65 |
| low_pH_jason_reseq | 0.132 | 0.791 |
| NO_jason_reseq | 0.664 | 0.488 |
| B6_jason_reseq | -0.389 | -0.428 |
| MHCII_jason_reseq | 0.92 | -0.657 |
| Isoniazid02 | 0.087 | 0.384 |
| Rifampicin4 | 0.0 | 0.019 |
| Ethambutol3 | 0.229 | 0.687 |
| Meropenem3 | 0.244 | 0.816 |
| Vancomycin16 | -0.069 | 0.249 |
| Rv2680_day32 | -0.184 | 0.324 |
| H37Rv_KO_MarP | -0.018 | -0.365 |
| hypoxia_3wks | -3.007 | -5.834 |
| hypoxia_6wks | -3.721 | -6.0 |
| glycerol | -0.13 | 0.176 |
| cholesterol | -0.325 | -0.738 |
| AJ | -0.501 | 0.103 |
| Bibs02 | 0.338 | 0.225 |
| Bibs02c | -0.364 | 0.047 |
| BL6 | -1.545 | -2.461 |
| BL6a | -0.881 | -1.009 |
| BXD01 | -1.203 | -0.803 |
| BXD010 | -0.875 | 0.189 |
| BXD011 | -1.288 | -1.268 |
| BXD03 | -2.275 | -1.632 |
| BXD04 | -1.251 | -1.609 |
| BXD05 | -1.693 | -0.843 |
| BXD06 | -1.451 | -1.737 |
| BXD07 | -1.561 | -1.134 |
| BXD08 | -0.695 | -1.512 |
| BXD09 | -1.768 | -1.187 |
| CAST | -0.439 | -0.067 |
| CCcont | -2.411 | -1.884 |
| DS01 | -0.489 | -0.299 |
| DS02 | -1.038 | 0.487 |
| DS04 | -0.402 | -0.125 |
| DS0c | 0.297 | -0.823 |
| GP01 | 0.047 | -0.797 |
| GP02 | -0.826 | -1.019 |
| GP0c | -0.226 | -0.451 |
| NOD | -0.179 | 0.387 |
| NZO | -0.282 | -0.189 |
| PWK | -0.492 | -0.531 |
| H37Rv_KO_CtpC | -0.672 | -1.617 |
| H37Rv_KO_CtpD | -2.176 | -3.078 |
| H37Rv_KO_Rv1272 | 0.019 | -0.008 |
| H37Rv_KO_SugABC | 0.117 | 0.117 |
| H37Rv_KO_MbtN | -0.222 | -1.207 |
| Trans05 | 0.38 | 0.534 |
| macrophage_unactivated | -2.08 | -0.83 |
| IL1 | -2.308 | -2.45 |
| Rapamycin | -1.476 | -1.881 |
| Tcell | -1.352 | -1.73 |
| GMCSF | 0.0 | -1.471 |
| IFNab | -1.66 | -1.445 |
| IFNg | -1.97 | -1.871 |
| IFNg_GMCSF1 | -1.405 | -0.179 |
| Rv1432_day32 | 0.027 | 0.102 |
| Rv1565c_day32 | -0.139 | 1.529 |
| secA2_input | -1.061 | -1.182 |
| delta_Rv3594 | 0.448 | 0.698 |
| delta_Rv3717 | 0.641 | 0.958 |
| delta_Rv3811 | 0.573 | 0.442 |
| delta_Rv0954 | -0.195 | -0.266 |
| PonA1 | -0.504 | 0.223 |
| EccD1_KO | 0.25 | 0.513 |
| EspI_KO | -0.18 | 0.627 |
| PE35_KO | 0.429 | 1.689 |
| PPE68_KO | 0.941 | 1.043 |
| glycerol2 | 0.265 | -0.22 |
| lignocerate | -0.55 | -0.191 |
| oleate | 0.149 | -0.054 |
| phosphatidylcholine | 0.043 | -0.387 |
| acetate | -0.823 | -0.477 |
| glucAc | -0.838 | -0.931 |
| Rv0950ko | -0.205 | 0.244 |
| Rv1096ko | 0.428 | 0.196 |
| Rv3684ko | 0.563 | 0.704 |
| delta_otsA_trehalose | -0.231 | 0.032 |