Top 10 genes with highest correlation to Rv1977/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2961/- | (cc=0.4584) | info on Rv2961/- |
| Rv2329c/narK1 | (cc=0.4524) | info on Rv2329c/narK1 |
| Rv2327/- | (cc=0.4454) | info on Rv2327/- |
| Rv3135/PPE50 | (cc=0.4136) | info on Rv3135/PPE50 |
| Rv1030/kdpB | (cc=0.4133) | info on Rv1030/kdpB |
| Rv2627c/- | (cc=0.3919) | info on Rv2627c/- |
| Rv2018/- | (cc=0.3851) | info on Rv2018/- |
| Rv1132/- | (cc=0.3846) | info on Rv1132/- |
| Rv1185c/fadD21 | (cc=0.3805) | info on Rv1185c/fadD21 |
| Rv0071/- | (cc=0.3792) | info on Rv0071/- |
Correlation of Rv1977/- with Rv2627c/-
Normalized LFCs for Rv1977/-:
(description and provenance of datasets)
| Rv1977/- | Rv2627c/- | |
| Fe_supp_jason_reseq | 0.316 | -0.598 |
| low_pH_jason_reseq | 0.027 | 0.83 |
| NO_jason_reseq | 0.281 | 0.189 |
| B6_jason_reseq | 0.913 | 0.229 |
| MHCII_jason_reseq | 1.289 | 1.469 |
| Isoniazid02 | -0.221 | -0.3 |
| Rifampicin4 | -0.046 | 0.295 |
| Ethambutol3 | 0.444 | 1.036 |
| Meropenem3 | 0.232 | -0.111 |
| Vancomycin16 | -0.287 | 0.058 |
| Rv2680_day32 | 2.328 | 0.157 |
| H37Rv_KO_MarP | -0.085 | 0.614 |
| hypoxia_3wks | -0.152 | -0.439 |
| hypoxia_6wks | -0.568 | -1.244 |
| glycerol | 0.477 | -1.554 |
| cholesterol | 0.184 | -1.541 |
| AJ | -0.018 | 0.341 |
| Bibs02 | 0.564 | 0.064 |
| Bibs02c | -0.061 | 0.634 |
| BL6 | 0.108 | -0.456 |
| BL6a | -0.564 | -0.511 |
| BXD01 | -0.316 | -1.236 |
| BXD010 | -0.075 | -0.809 |
| BXD011 | 0.11 | -1.077 |
| BXD03 | -0.4 | -0.922 |
| BXD04 | -0.521 | -1.346 |
| BXD05 | -0.535 | -0.808 |
| BXD06 | -0.096 | -0.91 |
| BXD07 | -0.372 | -1.314 |
| BXD08 | -0.497 | -0.952 |
| BXD09 | -0.21 | -0.981 |
| CAST | 0.199 | 0.557 |
| CCcont | -0.141 | -1.043 |
| DS01 | -0.058 | 0.062 |
| DS02 | 0.137 | 0.6 |
| DS04 | 0.308 | -1.134 |
| DS0c | 0.596 | 0.479 |
| GP01 | -0.723 | -2.008 |
| GP02 | -0.237 | -1.925 |
| GP0c | -0.525 | -1.448 |
| NOD | 0.53 | 0.0 |
| NZO | 0.231 | -0.363 |
| PWK | -0.406 | -0.398 |
| H37Rv_KO_CtpC | 0.14 | -0.901 |
| H37Rv_KO_CtpD | 0.674 | -0.43 |
| H37Rv_KO_Rv1272 | 0.127 | -1.034 |
| H37Rv_KO_SugABC | -0.43 | -0.1 |
| H37Rv_KO_MbtN | 0.108 | -0.289 |
| Trans05 | -0.559 | -1.595 |
| macrophage_unactivated | 0.398 | -1.13 |
| IL1 | 1.528 | 0.317 |
| Rapamycin | 0.813 | 0.417 |
| Tcell | 0.642 | -1.73 |
| GMCSF | 0.114 | 0.124 |
| IFNab | 0.538 | -0.562 |
| IFNg | 0.82 | 0.0 |
| IFNg_GMCSF1 | 0.814 | 0.518 |
| Rv1432_day32 | 2.198 | 0.0 |
| Rv1565c_day32 | 0.218 | 0.229 |
| secA2_input | -0.982 | -1.392 |
| delta_Rv3594 | 0.193 | 0.385 |
| delta_Rv3717 | 0.604 | 0.185 |
| delta_Rv3811 | 0.549 | 0.5 |
| delta_Rv0954 | 0.258 | -1.083 |
| PonA1 | 0.287 | 0.039 |
| EccD1_KO | -0.122 | -2.023 |
| EspI_KO | 0.202 | -0.297 |
| PE35_KO | -0.128 | -0.563 |
| PPE68_KO | 0.022 | -0.474 |
| glycerol2 | 0.723 | 0.328 |
| lignocerate | 0.303 | -0.106 |
| oleate | 0.184 | 0.191 |
| phosphatidylcholine | 0.342 | 0.395 |
| acetate | 0.71 | 0.224 |
| glucAc | -0.062 | -0.154 |
| Rv0950ko | -0.648 | 0.681 |
| Rv1096ko | -0.446 | -0.136 |
| Rv3684ko | -0.301 | 1.097 |
| delta_otsA_trehalose | -0.879 | -0.199 |