Top 10 genes with highest correlation to Rv1977/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2961/- | (cc=0.4584) | info on Rv2961/- |
| Rv2329c/narK1 | (cc=0.4524) | info on Rv2329c/narK1 |
| Rv2327/- | (cc=0.4454) | info on Rv2327/- |
| Rv3135/PPE50 | (cc=0.4136) | info on Rv3135/PPE50 |
| Rv1030/kdpB | (cc=0.4133) | info on Rv1030/kdpB |
| Rv2627c/- | (cc=0.3919) | info on Rv2627c/- |
| Rv2018/- | (cc=0.3851) | info on Rv2018/- |
| Rv1132/- | (cc=0.3846) | info on Rv1132/- |
| Rv1185c/fadD21 | (cc=0.3805) | info on Rv1185c/fadD21 |
| Rv0071/- | (cc=0.3792) | info on Rv0071/- |
Correlation of Rv1977/- with Rv2327/-
Normalized LFCs for Rv1977/-:
(description and provenance of datasets)
| Rv1977/- | Rv2327/- | |
| Fe_supp_jason_reseq | 0.316 | 1.217 |
| low_pH_jason_reseq | 0.027 | -3.108 |
| NO_jason_reseq | 0.281 | -1.047 |
| B6_jason_reseq | 0.913 | -0.443 |
| MHCII_jason_reseq | 1.289 | -1.731 |
| Isoniazid02 | -0.221 | 1.89 |
| Rifampicin4 | -0.046 | -0.341 |
| Ethambutol3 | 0.444 | 1.042 |
| Meropenem3 | 0.232 | -0.851 |
| Vancomycin16 | -0.287 | -0.334 |
| Rv2680_day32 | 2.328 | -0.131 |
| H37Rv_KO_MarP | -0.085 | -0.327 |
| hypoxia_3wks | -0.152 | -0.845 |
| hypoxia_6wks | -0.568 | 0.067 |
| glycerol | 0.477 | -1.295 |
| cholesterol | 0.184 | -0.354 |
| AJ | -0.018 | -2.123 |
| Bibs02 | 0.564 | -1.221 |
| Bibs02c | -0.061 | -0.435 |
| BL6 | 0.108 | -0.768 |
| BL6a | -0.564 | -2.19 |
| BXD01 | -0.316 | -2.23 |
| BXD010 | -0.075 | -0.69 |
| BXD011 | 0.11 | -2.18 |
| BXD03 | -0.4 | -1.335 |
| BXD04 | -0.521 | -2.428 |
| BXD05 | -0.535 | -2.52 |
| BXD06 | -0.096 | -1.719 |
| BXD07 | -0.372 | -1.316 |
| BXD08 | -0.497 | -2.491 |
| BXD09 | -0.21 | -1.388 |
| CAST | 0.199 | -1.805 |
| CCcont | -0.141 | -0.768 |
| DS01 | -0.058 | -0.45 |
| DS02 | 0.137 | 0.482 |
| DS04 | 0.308 | -2.403 |
| DS0c | 0.596 | -1.332 |
| GP01 | -0.723 | -1.489 |
| GP02 | -0.237 | -0.089 |
| GP0c | -0.525 | 0.624 |
| NOD | 0.53 | -0.548 |
| NZO | 0.231 | -0.15 |
| PWK | -0.406 | -1.795 |
| H37Rv_KO_CtpC | 0.14 | -0.338 |
| H37Rv_KO_CtpD | 0.674 | 0.139 |
| H37Rv_KO_Rv1272 | 0.127 | -1.105 |
| H37Rv_KO_SugABC | -0.43 | -1.624 |
| H37Rv_KO_MbtN | 0.108 | -0.98 |
| Trans05 | -0.559 | -2.565 |
| macrophage_unactivated | 0.398 | -0.208 |
| IL1 | 1.528 | 1.086 |
| Rapamycin | 0.813 | 0.641 |
| Tcell | 0.642 | 0.495 |
| GMCSF | 0.114 | -1.545 |
| IFNab | 0.538 | 0.795 |
| IFNg | 0.82 | 0.0 |
| IFNg_GMCSF1 | 0.814 | 0.198 |
| Rv1432_day32 | 2.198 | 1.982 |
| Rv1565c_day32 | 0.218 | 0.509 |
| secA2_input | -0.982 | -0.945 |
| delta_Rv3594 | 0.193 | -0.323 |
| delta_Rv3717 | 0.604 | -0.839 |
| delta_Rv3811 | 0.549 | -1.213 |
| delta_Rv0954 | 0.258 | 1.647 |
| PonA1 | 0.287 | 0.464 |
| EccD1_KO | -0.122 | -1.434 |
| EspI_KO | 0.202 | 0.231 |
| PE35_KO | -0.128 | -1.033 |
| PPE68_KO | 0.022 | -1.581 |
| glycerol2 | 0.723 | -0.722 |
| lignocerate | 0.303 | -1.218 |
| oleate | 0.184 | -0.457 |
| phosphatidylcholine | 0.342 | -0.721 |
| acetate | 0.71 | 0.116 |
| glucAc | -0.062 | -2.067 |
| Rv0950ko | -0.648 | -0.573 |
| Rv1096ko | -0.446 | -1.559 |
| Rv3684ko | -0.301 | 0.373 |
| delta_otsA_trehalose | -0.879 | -2.964 |