Top 10 genes with highest correlation to Rv1907c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2405/- | (cc=0.6089) | info on Rv2405/- |
| Rv1325c/PE_PGRS24 | (cc=0.6008) | info on Rv1325c/PE_PGRS24 |
| Rv3395c/- | (cc=0.5988) | info on Rv3395c/- |
| Rv0571c/- | (cc=0.5965) | info on Rv0571c/- |
| Rv0776c/- | (cc=0.5918) | info on Rv0776c/- |
| Rv2657c/- | (cc=0.5767) | info on Rv2657c/- |
| Rv3056/dinP | (cc=0.5598) | info on Rv3056/dinP |
| Rv2550c/vapB20 | (cc=0.5514) | info on Rv2550c/vapB20 |
| Rv1852/ureG | (cc=0.5358) | info on Rv1852/ureG |
| Rv0316/- | (cc=0.5343) | info on Rv0316/- |
Correlation of Rv1907c/- with Rv2550c/vapB20
Normalized LFCs for Rv1907c/-:
(description and provenance of datasets)
| Rv1907c/- | Rv2550c/vapB20 | |
| Fe_supp_jason_reseq | -0.608 | -1.414 |
| low_pH_jason_reseq | -0.41 | -0.612 |
| NO_jason_reseq | -0.121 | -0.546 |
| B6_jason_reseq | -0.581 | 0.49 |
| MHCII_jason_reseq | 0.0 | -0.47 |
| Isoniazid02 | 1.03 | 1.2 |
| Rifampicin4 | 0.236 | -0.114 |
| Ethambutol3 | 1.12 | 0.626 |
| Meropenem3 | 0.231 | 0.509 |
| Vancomycin16 | 0.101 | -0.111 |
| Rv2680_day32 | -0.433 | -1.029 |
| H37Rv_KO_MarP | -0.052 | -1.116 |
| hypoxia_3wks | -0.259 | 0.0 |
| hypoxia_6wks | -0.219 | 0.614 |
| glycerol | 0.0 | -2.956 |
| cholesterol | -0.024 | -1.071 |
| AJ | 0.321 | 0.266 |
| Bibs02 | -0.346 | -0.268 |
| Bibs02c | 0.15 | 0.0 |
| BL6 | -1.272 | -1.436 |
| BL6a | -0.433 | -0.667 |
| BXD01 | -0.272 | -1.619 |
| BXD010 | 0.301 | -0.947 |
| BXD011 | -0.719 | -1.109 |
| BXD03 | -0.31 | -0.513 |
| BXD04 | -0.151 | -0.915 |
| BXD05 | -0.228 | -1.97 |
| BXD06 | -0.481 | -1.21 |
| BXD07 | -0.143 | -0.619 |
| BXD08 | -0.418 | -0.905 |
| BXD09 | -1.029 | -0.564 |
| CAST | 0.075 | -0.727 |
| CCcont | -0.421 | -0.326 |
| DS01 | 0.72 | 2.091 |
| DS02 | 0.438 | 1.542 |
| DS04 | 0.951 | 1.449 |
| DS0c | 0.688 | 1.197 |
| GP01 | -0.187 | -1.508 |
| GP02 | -0.667 | -1.597 |
| GP0c | 0.61 | -1.132 |
| NOD | 0.407 | -0.29 |
| NZO | 0.049 | -0.8 |
| PWK | 0.548 | -0.58 |
| H37Rv_KO_CtpC | -0.388 | 0.164 |
| H37Rv_KO_CtpD | 0.928 | -1.575 |
| H37Rv_KO_Rv1272 | 0.43 | -1.087 |
| H37Rv_KO_SugABC | 0.592 | -0.111 |
| H37Rv_KO_MbtN | -0.145 | -0.048 |
| Trans05 | 0.681 | 0.625 |
| macrophage_unactivated | 0.429 | -1.36 |
| IL1 | -0.047 | -2.572 |
| Rapamycin | -0.301 | -2.167 |
| Tcell | 0.052 | 0.15 |
| GMCSF | -1.716 | 0.462 |
| IFNab | -1.022 | 1.001 |
| IFNg | -1.122 | -1.323 |
| IFNg_GMCSF1 | 0.776 | -1.766 |
| Rv1432_day32 | 0.348 | -0.533 |
| Rv1565c_day32 | 0.441 | 0.305 |
| secA2_input | 1.177 | 0.435 |
| delta_Rv3594 | 2.291 | 1.415 |
| delta_Rv3717 | 0.984 | 0.245 |
| delta_Rv3811 | 1.561 | 1.425 |
| delta_Rv0954 | 0.561 | 0.516 |
| PonA1 | 1.064 | -0.377 |
| EccD1_KO | -0.358 | 0.168 |
| EspI_KO | 0.074 | -1.383 |
| PE35_KO | 0.187 | -0.05 |
| PPE68_KO | 0.589 | 0.109 |
| glycerol2 | 1.61 | 2.802 |
| lignocerate | 1.153 | 2.792 |
| oleate | 0.662 | 0.829 |
| phosphatidylcholine | 1.382 | 2.697 |
| acetate | 2.678 | 3.263 |
| glucAc | 0.964 | 2.21 |
| Rv0950ko | -0.691 | 0.238 |
| Rv1096ko | 0.85 | -0.863 |
| Rv3684ko | 0.75 | -0.331 |
| delta_otsA_trehalose | 0.684 | -0.353 |