Top 10 genes with highest correlation to Rv1907c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2405/- | (cc=0.6089) | info on Rv2405/- |
| Rv1325c/PE_PGRS24 | (cc=0.6008) | info on Rv1325c/PE_PGRS24 |
| Rv3395c/- | (cc=0.5988) | info on Rv3395c/- |
| Rv0571c/- | (cc=0.5965) | info on Rv0571c/- |
| Rv0776c/- | (cc=0.5918) | info on Rv0776c/- |
| Rv2657c/- | (cc=0.5767) | info on Rv2657c/- |
| Rv3056/dinP | (cc=0.5598) | info on Rv3056/dinP |
| Rv2550c/vapB20 | (cc=0.5514) | info on Rv2550c/vapB20 |
| Rv1852/ureG | (cc=0.5358) | info on Rv1852/ureG |
| Rv0316/- | (cc=0.5343) | info on Rv0316/- |
Correlation of Rv1907c/- with Rv1852/ureG
Normalized LFCs for Rv1907c/-:
(description and provenance of datasets)
| Rv1907c/- | Rv1852/ureG | |
| Fe_supp_jason_reseq | -0.608 | -0.595 |
| low_pH_jason_reseq | -0.41 | -1.722 |
| NO_jason_reseq | -0.121 | -0.507 |
| B6_jason_reseq | -0.581 | -2.156 |
| MHCII_jason_reseq | 0.0 | -2.675 |
| Isoniazid02 | 1.03 | 0.416 |
| Rifampicin4 | 0.236 | -0.349 |
| Ethambutol3 | 1.12 | 0.084 |
| Meropenem3 | 0.231 | 0.672 |
| Vancomycin16 | 0.101 | 0.0 |
| Rv2680_day32 | -0.433 | -2.715 |
| H37Rv_KO_MarP | -0.052 | 0.837 |
| hypoxia_3wks | -0.259 | -1.95 |
| hypoxia_6wks | -0.219 | -1.169 |
| glycerol | 0.0 | -0.844 |
| cholesterol | -0.024 | 0.341 |
| AJ | 0.321 | 0.449 |
| Bibs02 | -0.346 | -0.053 |
| Bibs02c | 0.15 | -0.497 |
| BL6 | -1.272 | 0.103 |
| BL6a | -0.433 | -1.808 |
| BXD01 | -0.272 | -1.786 |
| BXD010 | 0.301 | -2.505 |
| BXD011 | -0.719 | -0.67 |
| BXD03 | -0.31 | -0.738 |
| BXD04 | -0.151 | -1.434 |
| BXD05 | -0.228 | -0.359 |
| BXD06 | -0.481 | -1.859 |
| BXD07 | -0.143 | -1.841 |
| BXD08 | -0.418 | -0.832 |
| BXD09 | -1.029 | -1.404 |
| CAST | 0.075 | -0.108 |
| CCcont | -0.421 | -0.829 |
| DS01 | 0.72 | -1.711 |
| DS02 | 0.438 | -0.696 |
| DS04 | 0.951 | -0.637 |
| DS0c | 0.688 | 0.281 |
| GP01 | -0.187 | -1.354 |
| GP02 | -0.667 | -1.057 |
| GP0c | 0.61 | -1.728 |
| NOD | 0.407 | -1.679 |
| NZO | 0.049 | 0.451 |
| PWK | 0.548 | -0.176 |
| H37Rv_KO_CtpC | -0.388 | -1.598 |
| H37Rv_KO_CtpD | 0.928 | 0.105 |
| H37Rv_KO_Rv1272 | 0.43 | 0.293 |
| H37Rv_KO_SugABC | 0.592 | -0.825 |
| H37Rv_KO_MbtN | -0.145 | 0.029 |
| Trans05 | 0.681 | 0.727 |
| macrophage_unactivated | 0.429 | 0.581 |
| IL1 | -0.047 | -0.303 |
| Rapamycin | -0.301 | -0.313 |
| Tcell | 0.052 | -0.583 |
| GMCSF | -1.716 | -0.515 |
| IFNab | -1.022 | 1.016 |
| IFNg | -1.122 | -0.152 |
| IFNg_GMCSF1 | 0.776 | 0.842 |
| Rv1432_day32 | 0.348 | -0.18 |
| Rv1565c_day32 | 0.441 | 0.058 |
| secA2_input | 1.177 | 1.268 |
| delta_Rv3594 | 2.291 | 1.199 |
| delta_Rv3717 | 0.984 | 0.559 |
| delta_Rv3811 | 1.561 | 0.0 |
| delta_Rv0954 | 0.561 | 2.305 |
| PonA1 | 1.064 | -2.069 |
| EccD1_KO | -0.358 | -0.635 |
| EspI_KO | 0.074 | -0.319 |
| PE35_KO | 0.187 | 1.076 |
| PPE68_KO | 0.589 | -0.038 |
| glycerol2 | 1.61 | 3.213 |
| lignocerate | 1.153 | 3.973 |
| oleate | 0.662 | 0.196 |
| phosphatidylcholine | 1.382 | 3.169 |
| acetate | 2.678 | 3.498 |
| glucAc | 0.964 | 3.418 |
| Rv0950ko | -0.691 | -0.151 |
| Rv1096ko | 0.85 | 0.0 |
| Rv3684ko | 0.75 | 0.789 |
| delta_otsA_trehalose | 0.684 | 2.628 |