Top 10 genes with highest correlation to Rv1907c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2405/- | (cc=0.6089) | info on Rv2405/- |
| Rv1325c/PE_PGRS24 | (cc=0.6008) | info on Rv1325c/PE_PGRS24 |
| Rv3395c/- | (cc=0.5988) | info on Rv3395c/- |
| Rv0571c/- | (cc=0.5965) | info on Rv0571c/- |
| Rv0776c/- | (cc=0.5918) | info on Rv0776c/- |
| Rv2657c/- | (cc=0.5767) | info on Rv2657c/- |
| Rv3056/dinP | (cc=0.5598) | info on Rv3056/dinP |
| Rv2550c/vapB20 | (cc=0.5514) | info on Rv2550c/vapB20 |
| Rv1852/ureG | (cc=0.5358) | info on Rv1852/ureG |
| Rv0316/- | (cc=0.5343) | info on Rv0316/- |
Correlation of Rv1907c/- with Rv0316/-
Normalized LFCs for Rv1907c/-:
(description and provenance of datasets)
| Rv1907c/- | Rv0316/- | |
| Fe_supp_jason_reseq | -0.608 | -1.37 |
| low_pH_jason_reseq | -0.41 | -0.494 |
| NO_jason_reseq | -0.121 | 0.323 |
| B6_jason_reseq | -0.581 | -0.788 |
| MHCII_jason_reseq | 0.0 | -0.414 |
| Isoniazid02 | 1.03 | 0.633 |
| Rifampicin4 | 0.236 | 1.178 |
| Ethambutol3 | 1.12 | 0.64 |
| Meropenem3 | 0.231 | 0.478 |
| Vancomycin16 | 0.101 | 0.584 |
| Rv2680_day32 | -0.433 | 0.061 |
| H37Rv_KO_MarP | -0.052 | 0.214 |
| hypoxia_3wks | -0.259 | -0.606 |
| hypoxia_6wks | -0.219 | -1.376 |
| glycerol | 0.0 | -0.66 |
| cholesterol | -0.024 | -0.105 |
| AJ | 0.321 | -0.294 |
| Bibs02 | -0.346 | 1.318 |
| Bibs02c | 0.15 | 0.708 |
| BL6 | -1.272 | -1.256 |
| BL6a | -0.433 | -0.954 |
| BXD01 | -0.272 | -1.129 |
| BXD010 | 0.301 | -1.794 |
| BXD011 | -0.719 | -1.351 |
| BXD03 | -0.31 | -0.896 |
| BXD04 | -0.151 | -1.265 |
| BXD05 | -0.228 | -1.351 |
| BXD06 | -0.481 | -1.551 |
| BXD07 | -0.143 | -1.39 |
| BXD08 | -0.418 | -1.288 |
| BXD09 | -1.029 | -1.219 |
| CAST | 0.075 | 0.23 |
| CCcont | -0.421 | -0.951 |
| DS01 | 0.72 | -0.067 |
| DS02 | 0.438 | 1.007 |
| DS04 | 0.951 | 0.586 |
| DS0c | 0.688 | -0.751 |
| GP01 | -0.187 | 0.416 |
| GP02 | -0.667 | 0.104 |
| GP0c | 0.61 | -0.305 |
| NOD | 0.407 | 0.714 |
| NZO | 0.049 | -0.468 |
| PWK | 0.548 | -0.202 |
| H37Rv_KO_CtpC | -0.388 | -0.856 |
| H37Rv_KO_CtpD | 0.928 | 0.752 |
| H37Rv_KO_Rv1272 | 0.43 | -2.517 |
| H37Rv_KO_SugABC | 0.592 | -0.738 |
| H37Rv_KO_MbtN | -0.145 | 0.256 |
| Trans05 | 0.681 | -0.531 |
| macrophage_unactivated | 0.429 | -0.754 |
| IL1 | -0.047 | -1.554 |
| Rapamycin | -0.301 | -1.203 |
| Tcell | 0.052 | -0.779 |
| GMCSF | -1.716 | -1.436 |
| IFNab | -1.022 | -1.025 |
| IFNg | -1.122 | -0.639 |
| IFNg_GMCSF1 | 0.776 | -0.958 |
| Rv1432_day32 | 0.348 | 1.275 |
| Rv1565c_day32 | 0.441 | 0.063 |
| secA2_input | 1.177 | 0.261 |
| delta_Rv3594 | 2.291 | 0.684 |
| delta_Rv3717 | 0.984 | -0.305 |
| delta_Rv3811 | 1.561 | 0.471 |
| delta_Rv0954 | 0.561 | 1.067 |
| PonA1 | 1.064 | 0.892 |
| EccD1_KO | -0.358 | -0.365 |
| EspI_KO | 0.074 | -0.285 |
| PE35_KO | 0.187 | 0.093 |
| PPE68_KO | 0.589 | -0.07 |
| glycerol2 | 1.61 | 0.977 |
| lignocerate | 1.153 | 0.528 |
| oleate | 0.662 | 0.21 |
| phosphatidylcholine | 1.382 | 0.909 |
| acetate | 2.678 | 1.238 |
| glucAc | 0.964 | 0.972 |
| Rv0950ko | -0.691 | 0.778 |
| Rv1096ko | 0.85 | 0.175 |
| Rv3684ko | 0.75 | 0.239 |
| delta_otsA_trehalose | 0.684 | -1.132 |