Top 10 genes with highest correlation to Rv1833c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2657c/- | (cc=0.6) | info on Rv2657c/- |
| Rv2426c/- | (cc=0.5899) | info on Rv2426c/- |
| Rv2474c/- | (cc=0.572) | info on Rv2474c/- |
| Rv1070c/echA8 | (cc=0.5651) | info on Rv1070c/echA8 |
| Rv1378c/- | (cc=0.5527) | info on Rv1378c/- |
| Rv3395c/- | (cc=0.5516) | info on Rv3395c/- |
| Rv1731/gabD2 | (cc=0.5414) | info on Rv1731/gabD2 |
| Rv3538/- | (cc=0.5337) | info on Rv3538/- |
| Rv3344c/PE_PGRS49 | (cc=0.5288) | info on Rv3344c/PE_PGRS49 |
| Rv1907c/- | (cc=0.5267) | info on Rv1907c/- |
Correlation of Rv1833c/- with Rv1907c/-
Normalized LFCs for Rv1833c/-:
(description and provenance of datasets)
| Rv1833c/- | Rv1907c/- | |
| Fe_supp_jason_reseq | -0.456 | -0.608 |
| low_pH_jason_reseq | -0.502 | -0.41 |
| NO_jason_reseq | 0.071 | -0.121 |
| B6_jason_reseq | -0.689 | -0.581 |
| MHCII_jason_reseq | -0.529 | 0.0 |
| Isoniazid02 | 1.359 | 1.03 |
| Rifampicin4 | 0.801 | 0.236 |
| Ethambutol3 | 2.69 | 1.12 |
| Meropenem3 | 1.206 | 0.231 |
| Vancomycin16 | 0.464 | 0.101 |
| Rv2680_day32 | -0.806 | -0.433 |
| H37Rv_KO_MarP | -0.291 | -0.052 |
| hypoxia_3wks | -0.877 | -0.259 |
| hypoxia_6wks | 0.221 | -0.219 |
| glycerol | -0.408 | 0.0 |
| cholesterol | 0.541 | -0.024 |
| AJ | -1.303 | 0.321 |
| Bibs02 | -0.54 | -0.346 |
| Bibs02c | -0.279 | 0.15 |
| BL6 | -0.346 | -1.272 |
| BL6a | -0.509 | -0.433 |
| BXD01 | -0.299 | -0.272 |
| BXD010 | -0.329 | 0.301 |
| BXD011 | -0.038 | -0.719 |
| BXD03 | -1.04 | -0.31 |
| BXD04 | -0.648 | -0.151 |
| BXD05 | -0.398 | -0.228 |
| BXD06 | 0.226 | -0.481 |
| BXD07 | -0.127 | -0.143 |
| BXD08 | -0.446 | -0.418 |
| BXD09 | -0.457 | -1.029 |
| CAST | 0.776 | 0.075 |
| CCcont | -0.427 | -0.421 |
| DS01 | 0.2 | 0.72 |
| DS02 | 0.369 | 0.438 |
| DS04 | -0.242 | 0.951 |
| DS0c | -0.308 | 0.688 |
| GP01 | -0.998 | -0.187 |
| GP02 | 0.435 | -0.667 |
| GP0c | 0.236 | 0.61 |
| NOD | 1.29 | 0.407 |
| NZO | -0.532 | 0.049 |
| PWK | -0.396 | 0.548 |
| H37Rv_KO_CtpC | -0.344 | -0.388 |
| H37Rv_KO_CtpD | 0.292 | 0.928 |
| H37Rv_KO_Rv1272 | 0.139 | 0.43 |
| H37Rv_KO_SugABC | -0.732 | 0.592 |
| H37Rv_KO_MbtN | 1.985 | -0.145 |
| Trans05 | -0.241 | 0.681 |
| macrophage_unactivated | -0.862 | 0.429 |
| IL1 | -1.255 | -0.047 |
| Rapamycin | -0.706 | -0.301 |
| Tcell | -1.03 | 0.052 |
| GMCSF | -0.43 | -1.716 |
| IFNab | -0.868 | -1.022 |
| IFNg | -1.486 | -1.122 |
| IFNg_GMCSF1 | -0.386 | 0.776 |
| Rv1432_day32 | -0.153 | 0.348 |
| Rv1565c_day32 | 0.13 | 0.441 |
| secA2_input | -1.086 | 1.177 |
| delta_Rv3594 | 0.716 | 2.291 |
| delta_Rv3717 | 0.443 | 0.984 |
| delta_Rv3811 | 0.915 | 1.561 |
| delta_Rv0954 | 0.756 | 0.561 |
| PonA1 | 1.118 | 1.064 |
| EccD1_KO | 0.039 | -0.358 |
| EspI_KO | -0.533 | 0.074 |
| PE35_KO | -0.344 | 0.187 |
| PPE68_KO | 0.31 | 0.589 |
| glycerol2 | 0.224 | 1.61 |
| lignocerate | 1.335 | 1.153 |
| oleate | -0.123 | 0.662 |
| phosphatidylcholine | 0.668 | 1.382 |
| acetate | 2.091 | 2.678 |
| glucAc | 1.638 | 0.964 |
| Rv0950ko | 0.259 | -0.691 |
| Rv1096ko | 0.383 | 0.85 |
| Rv3684ko | 0.996 | 0.75 |
| delta_otsA_trehalose | 0.44 | 0.684 |