Top 10 genes with highest correlation to Rv1833c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2657c/- | (cc=0.6) | info on Rv2657c/- |
| Rv2426c/- | (cc=0.5899) | info on Rv2426c/- |
| Rv2474c/- | (cc=0.572) | info on Rv2474c/- |
| Rv1070c/echA8 | (cc=0.5651) | info on Rv1070c/echA8 |
| Rv1378c/- | (cc=0.5527) | info on Rv1378c/- |
| Rv3395c/- | (cc=0.5516) | info on Rv3395c/- |
| Rv1731/gabD2 | (cc=0.5414) | info on Rv1731/gabD2 |
| Rv3538/- | (cc=0.5337) | info on Rv3538/- |
| Rv3344c/PE_PGRS49 | (cc=0.5288) | info on Rv3344c/PE_PGRS49 |
| Rv1907c/- | (cc=0.5267) | info on Rv1907c/- |
Correlation of Rv1833c/- with Rv1070c/echA8
Normalized LFCs for Rv1833c/-:
(description and provenance of datasets)
| Rv1833c/- | Rv1070c/echA8 | |
| Fe_supp_jason_reseq | -0.456 | 0.044 |
| low_pH_jason_reseq | -0.502 | -1.447 |
| NO_jason_reseq | 0.071 | -2.363 |
| B6_jason_reseq | -0.689 | -0.763 |
| MHCII_jason_reseq | -0.529 | -0.657 |
| Isoniazid02 | 1.359 | 0.955 |
| Rifampicin4 | 0.801 | 1.156 |
| Ethambutol3 | 2.69 | 5.307 |
| Meropenem3 | 1.206 | 0.067 |
| Vancomycin16 | 0.464 | 1.772 |
| Rv2680_day32 | -0.806 | -1.231 |
| H37Rv_KO_MarP | -0.291 | -0.203 |
| hypoxia_3wks | -0.877 | -3.856 |
| hypoxia_6wks | 0.221 | -3.061 |
| glycerol | -0.408 | -0.493 |
| cholesterol | 0.541 | 0.361 |
| AJ | -1.303 | -0.598 |
| Bibs02 | -0.54 | 0.107 |
| Bibs02c | -0.279 | -0.982 |
| BL6 | -0.346 | -1.623 |
| BL6a | -0.509 | -2.381 |
| BXD01 | -0.299 | -3.234 |
| BXD010 | -0.329 | -2.02 |
| BXD011 | -0.038 | -3.162 |
| BXD03 | -1.04 | -2.674 |
| BXD04 | -0.648 | -1.65 |
| BXD05 | -0.398 | -2.155 |
| BXD06 | 0.226 | -2.347 |
| BXD07 | -0.127 | -2.454 |
| BXD08 | -0.446 | -1.678 |
| BXD09 | -0.457 | -2.661 |
| CAST | 0.776 | -1.416 |
| CCcont | -0.427 | -1.565 |
| DS01 | 0.2 | -0.241 |
| DS02 | 0.369 | 0.425 |
| DS04 | -0.242 | 0.18 |
| DS0c | -0.308 | -0.438 |
| GP01 | -0.998 | -2.249 |
| GP02 | 0.435 | -2.219 |
| GP0c | 0.236 | -1.975 |
| NOD | 1.29 | -1.811 |
| NZO | -0.532 | -1.913 |
| PWK | -0.396 | -0.986 |
| H37Rv_KO_CtpC | -0.344 | -1.22 |
| H37Rv_KO_CtpD | 0.292 | -2.977 |
| H37Rv_KO_Rv1272 | 0.139 | -2.365 |
| H37Rv_KO_SugABC | -0.732 | -1.687 |
| H37Rv_KO_MbtN | 1.985 | -2.192 |
| Trans05 | -0.241 | -1.637 |
| macrophage_unactivated | -0.862 | -2.898 |
| IL1 | -1.255 | -4.034 |
| Rapamycin | -0.706 | -1.706 |
| Tcell | -1.03 | -3.483 |
| GMCSF | -0.43 | -1.991 |
| IFNab | -0.868 | -2.279 |
| IFNg | -1.486 | -4.191 |
| IFNg_GMCSF1 | -0.386 | -3.249 |
| Rv1432_day32 | -0.153 | -0.404 |
| Rv1565c_day32 | 0.13 | -1.316 |
| secA2_input | -1.086 | -0.712 |
| delta_Rv3594 | 0.716 | 0.315 |
| delta_Rv3717 | 0.443 | -0.795 |
| delta_Rv3811 | 0.915 | -0.913 |
| delta_Rv0954 | 0.756 | -0.19 |
| PonA1 | 1.118 | 0.446 |
| EccD1_KO | 0.039 | 1.25 |
| EspI_KO | -0.533 | 1.192 |
| PE35_KO | -0.344 | 0.858 |
| PPE68_KO | 0.31 | 1.069 |
| glycerol2 | 0.224 | 0.761 |
| lignocerate | 1.335 | 0.994 |
| oleate | -0.123 | 0.737 |
| phosphatidylcholine | 0.668 | 0.57 |
| acetate | 2.091 | 0.603 |
| glucAc | 1.638 | 1.012 |
| Rv0950ko | 0.259 | 0.543 |
| Rv1096ko | 0.383 | 1.113 |
| Rv3684ko | 0.996 | 0.177 |
| delta_otsA_trehalose | 0.44 | -0.229 |