Top 10 genes with highest correlation to Rv1833c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2657c/- | (cc=0.6) | info on Rv2657c/- |
| Rv2426c/- | (cc=0.5899) | info on Rv2426c/- |
| Rv2474c/- | (cc=0.572) | info on Rv2474c/- |
| Rv1070c/echA8 | (cc=0.5651) | info on Rv1070c/echA8 |
| Rv1378c/- | (cc=0.5527) | info on Rv1378c/- |
| Rv3395c/- | (cc=0.5516) | info on Rv3395c/- |
| Rv1731/gabD2 | (cc=0.5414) | info on Rv1731/gabD2 |
| Rv3538/- | (cc=0.5337) | info on Rv3538/- |
| Rv3344c/PE_PGRS49 | (cc=0.5288) | info on Rv3344c/PE_PGRS49 |
| Rv1907c/- | (cc=0.5267) | info on Rv1907c/- |
Correlation of Rv1833c/- with Rv1731/gabD2
Normalized LFCs for Rv1833c/-:
(description and provenance of datasets)
| Rv1833c/- | Rv1731/gabD2 | |
| Fe_supp_jason_reseq | -0.456 | 1.414 |
| low_pH_jason_reseq | -0.502 | -0.234 |
| NO_jason_reseq | 0.071 | -0.496 |
| B6_jason_reseq | -0.689 | 0.968 |
| MHCII_jason_reseq | -0.529 | 0.922 |
| Isoniazid02 | 1.359 | 2.222 |
| Rifampicin4 | 0.801 | 0.612 |
| Ethambutol3 | 2.69 | 1.846 |
| Meropenem3 | 1.206 | 0.787 |
| Vancomycin16 | 0.464 | 0.485 |
| Rv2680_day32 | -0.806 | -0.77 |
| H37Rv_KO_MarP | -0.291 | 0.976 |
| hypoxia_3wks | -0.877 | -0.311 |
| hypoxia_6wks | 0.221 | -0.762 |
| glycerol | -0.408 | 0.143 |
| cholesterol | 0.541 | 0.103 |
| AJ | -1.303 | -0.844 |
| Bibs02 | -0.54 | -0.906 |
| Bibs02c | -0.279 | -0.126 |
| BL6 | -0.346 | -0.135 |
| BL6a | -0.509 | -0.679 |
| BXD01 | -0.299 | -0.878 |
| BXD010 | -0.329 | -0.388 |
| BXD011 | -0.038 | -0.631 |
| BXD03 | -1.04 | -1.159 |
| BXD04 | -0.648 | -0.293 |
| BXD05 | -0.398 | -0.531 |
| BXD06 | 0.226 | -0.527 |
| BXD07 | -0.127 | -0.787 |
| BXD08 | -0.446 | -0.512 |
| BXD09 | -0.457 | -0.89 |
| CAST | 0.776 | -0.609 |
| CCcont | -0.427 | -0.868 |
| DS01 | 0.2 | -0.313 |
| DS02 | 0.369 | -0.098 |
| DS04 | -0.242 | -0.257 |
| DS0c | -0.308 | -0.456 |
| GP01 | -0.998 | -0.752 |
| GP02 | 0.435 | -1.025 |
| GP0c | 0.236 | -1.226 |
| NOD | 1.29 | -0.392 |
| NZO | -0.532 | -0.247 |
| PWK | -0.396 | 0.098 |
| H37Rv_KO_CtpC | -0.344 | -1.118 |
| H37Rv_KO_CtpD | 0.292 | -1.473 |
| H37Rv_KO_Rv1272 | 0.139 | -0.469 |
| H37Rv_KO_SugABC | -0.732 | 0.11 |
| H37Rv_KO_MbtN | 1.985 | -0.511 |
| Trans05 | -0.241 | -1.015 |
| macrophage_unactivated | -0.862 | -1.117 |
| IL1 | -1.255 | -1.272 |
| Rapamycin | -0.706 | -0.365 |
| Tcell | -1.03 | -1.153 |
| GMCSF | -0.43 | -0.481 |
| IFNab | -0.868 | -1.182 |
| IFNg | -1.486 | -0.195 |
| IFNg_GMCSF1 | -0.386 | -1.471 |
| Rv1432_day32 | -0.153 | -0.086 |
| Rv1565c_day32 | 0.13 | 0.305 |
| secA2_input | -1.086 | -0.916 |
| delta_Rv3594 | 0.716 | -0.028 |
| delta_Rv3717 | 0.443 | -0.068 |
| delta_Rv3811 | 0.915 | 0.315 |
| delta_Rv0954 | 0.756 | 1.269 |
| PonA1 | 1.118 | 0.173 |
| EccD1_KO | 0.039 | 0.355 |
| EspI_KO | -0.533 | -0.108 |
| PE35_KO | -0.344 | 0.703 |
| PPE68_KO | 0.31 | 0.771 |
| glycerol2 | 0.224 | 0.398 |
| lignocerate | 1.335 | 1.058 |
| oleate | -0.123 | -0.679 |
| phosphatidylcholine | 0.668 | 0.73 |
| acetate | 2.091 | 0.938 |
| glucAc | 1.638 | 0.898 |
| Rv0950ko | 0.259 | 0.332 |
| Rv1096ko | 0.383 | 1.062 |
| Rv3684ko | 0.996 | 0.694 |
| delta_otsA_trehalose | 0.44 | 0.492 |