Top 10 genes with highest correlation to Rv1833c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2657c/- | (cc=0.6) | info on Rv2657c/- |
| Rv2426c/- | (cc=0.5899) | info on Rv2426c/- |
| Rv2474c/- | (cc=0.572) | info on Rv2474c/- |
| Rv1070c/echA8 | (cc=0.5651) | info on Rv1070c/echA8 |
| Rv1378c/- | (cc=0.5527) | info on Rv1378c/- |
| Rv3395c/- | (cc=0.5516) | info on Rv3395c/- |
| Rv1731/gabD2 | (cc=0.5414) | info on Rv1731/gabD2 |
| Rv3538/- | (cc=0.5337) | info on Rv3538/- |
| Rv3344c/PE_PGRS49 | (cc=0.5288) | info on Rv3344c/PE_PGRS49 |
| Rv1907c/- | (cc=0.5267) | info on Rv1907c/- |
Correlation of Rv1833c/- with Rv1378c/-
Normalized LFCs for Rv1833c/-:
(description and provenance of datasets)
| Rv1833c/- | Rv1378c/- | |
| Fe_supp_jason_reseq | -0.456 | -0.693 |
| low_pH_jason_reseq | -0.502 | -0.433 |
| NO_jason_reseq | 0.071 | 0.0 |
| B6_jason_reseq | -0.689 | -0.237 |
| MHCII_jason_reseq | -0.529 | 0.328 |
| Isoniazid02 | 1.359 | 0.259 |
| Rifampicin4 | 0.801 | 0.217 |
| Ethambutol3 | 2.69 | 0.647 |
| Meropenem3 | 1.206 | 0.861 |
| Vancomycin16 | 0.464 | 0.212 |
| Rv2680_day32 | -0.806 | -0.527 |
| H37Rv_KO_MarP | -0.291 | 0.581 |
| hypoxia_3wks | -0.877 | -0.227 |
| hypoxia_6wks | 0.221 | -0.244 |
| glycerol | -0.408 | 0.717 |
| cholesterol | 0.541 | 0.417 |
| AJ | -1.303 | 0.182 |
| Bibs02 | -0.54 | 0.356 |
| Bibs02c | -0.279 | 0.527 |
| BL6 | -0.346 | -0.925 |
| BL6a | -0.509 | -0.514 |
| BXD01 | -0.299 | -0.652 |
| BXD010 | -0.329 | -0.728 |
| BXD011 | -0.038 | -1.052 |
| BXD03 | -1.04 | -1.029 |
| BXD04 | -0.648 | -0.176 |
| BXD05 | -0.398 | -1.472 |
| BXD06 | 0.226 | -0.747 |
| BXD07 | -0.127 | -0.799 |
| BXD08 | -0.446 | -0.904 |
| BXD09 | -0.457 | -0.571 |
| CAST | 0.776 | 0.08 |
| CCcont | -0.427 | -0.797 |
| DS01 | 0.2 | 0.429 |
| DS02 | 0.369 | 0.022 |
| DS04 | -0.242 | 0.277 |
| DS0c | -0.308 | 1.045 |
| GP01 | -0.998 | -0.478 |
| GP02 | 0.435 | 0.289 |
| GP0c | 0.236 | -0.041 |
| NOD | 1.29 | -0.07 |
| NZO | -0.532 | 0.01 |
| PWK | -0.396 | 0.209 |
| H37Rv_KO_CtpC | -0.344 | -0.193 |
| H37Rv_KO_CtpD | 0.292 | 0.23 |
| H37Rv_KO_Rv1272 | 0.139 | -0.79 |
| H37Rv_KO_SugABC | -0.732 | -0.218 |
| H37Rv_KO_MbtN | 1.985 | 0.388 |
| Trans05 | -0.241 | -0.58 |
| macrophage_unactivated | -0.862 | -0.691 |
| IL1 | -1.255 | -1.261 |
| Rapamycin | -0.706 | -0.15 |
| Tcell | -1.03 | -1.219 |
| GMCSF | -0.43 | -0.211 |
| IFNab | -0.868 | -0.765 |
| IFNg | -1.486 | -0.834 |
| IFNg_GMCSF1 | -0.386 | -0.415 |
| Rv1432_day32 | -0.153 | 0.0 |
| Rv1565c_day32 | 0.13 | 0.474 |
| secA2_input | -1.086 | -1.024 |
| delta_Rv3594 | 0.716 | 0.399 |
| delta_Rv3717 | 0.443 | -0.263 |
| delta_Rv3811 | 0.915 | 0.034 |
| delta_Rv0954 | 0.756 | 0.375 |
| PonA1 | 1.118 | -0.027 |
| EccD1_KO | 0.039 | -0.474 |
| EspI_KO | -0.533 | 0.177 |
| PE35_KO | -0.344 | -0.061 |
| PPE68_KO | 0.31 | 0.0 |
| glycerol2 | 0.224 | 0.82 |
| lignocerate | 1.335 | 0.839 |
| oleate | -0.123 | 0.787 |
| phosphatidylcholine | 0.668 | 0.901 |
| acetate | 2.091 | 0.525 |
| glucAc | 1.638 | 1.018 |
| Rv0950ko | 0.259 | -0.069 |
| Rv1096ko | 0.383 | -0.35 |
| Rv3684ko | 0.996 | 0.18 |
| delta_otsA_trehalose | 0.44 | -0.211 |