Top 10 genes with highest correlation to Rv1727/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1228/lpqX | (cc=0.6164) | info on Rv1228/lpqX |
| Rv3060c/- | (cc=0.5399) | info on Rv3060c/- |
| Rv3439c/- | (cc=0.5389) | info on Rv3439c/- |
| Rv1473/- | (cc=0.5338) | info on Rv1473/- |
| Rv2902c/rnhB | (cc=0.5049) | info on Rv2902c/rnhB |
| Rv1992c/ctpG | (cc=0.5016) | info on Rv1992c/ctpG |
| Rv3208A/TB9.4 | (cc=0.4957) | info on Rv3208A/TB9.4 |
| Rv0910/- | (cc=0.4855) | info on Rv0910/- |
| Rv0433/- | (cc=0.4855) | info on Rv0433/- |
| Rv1495/mazF4 | (cc=0.4851) | info on Rv1495/mazF4 |
Correlation of Rv1727/- with Rv3208A/TB9.4
Normalized LFCs for Rv1727/-:
(description and provenance of datasets)
| Rv1727/- | Rv3208A/TB9.4 | |
| Fe_supp_jason_reseq | 0.027 | 2.398 |
| low_pH_jason_reseq | -0.718 | 0.694 |
| NO_jason_reseq | 0.299 | -0.263 |
| B6_jason_reseq | 1.146 | 1.57 |
| MHCII_jason_reseq | -0.728 | 0.929 |
| Isoniazid02 | 1.101 | -0.518 |
| Rifampicin4 | 0.945 | 0.826 |
| Ethambutol3 | 1.957 | 2.476 |
| Meropenem3 | 0.093 | 0.126 |
| Vancomycin16 | -0.122 | 0.783 |
| Rv2680_day32 | 0.681 | 0.442 |
| H37Rv_KO_MarP | -0.425 | 1.016 |
| hypoxia_3wks | -0.183 | -1.882 |
| hypoxia_6wks | -0.768 | -1.633 |
| glycerol | 0.607 | 0.549 |
| cholesterol | 1.003 | 0.952 |
| AJ | 0.082 | -1.264 |
| Bibs02 | -0.436 | -0.898 |
| Bibs02c | 0.285 | 0.887 |
| BL6 | -0.454 | -0.948 |
| BL6a | 0.27 | 1.267 |
| BXD01 | -0.679 | -0.479 |
| BXD010 | -1.64 | -1.775 |
| BXD011 | -0.903 | -0.226 |
| BXD03 | -0.66 | -1.273 |
| BXD04 | -0.928 | -1.268 |
| BXD05 | -0.021 | -1.38 |
| BXD06 | -1.357 | -0.967 |
| BXD07 | -0.758 | -1.096 |
| BXD08 | -0.38 | -1.688 |
| BXD09 | -0.344 | -1.267 |
| CAST | -0.704 | -1.255 |
| CCcont | -0.845 | 1.69 |
| DS01 | 0.245 | -0.71 |
| DS02 | -0.08 | -0.607 |
| DS04 | -0.327 | -0.76 |
| DS0c | -0.603 | 0.267 |
| GP01 | -1.319 | 0.559 |
| GP02 | 1.424 | -0.603 |
| GP0c | -0.603 | 0.796 |
| NOD | -0.9 | 0.877 |
| NZO | 0.091 | 0.217 |
| PWK | -0.909 | -0.816 |
| H37Rv_KO_CtpC | -1.309 | 0.421 |
| H37Rv_KO_CtpD | 0.914 | 0.509 |
| H37Rv_KO_Rv1272 | -0.461 | 1.508 |
| H37Rv_KO_SugABC | 0.238 | 1.283 |
| H37Rv_KO_MbtN | -0.529 | -1.428 |
| Trans05 | 0.292 | 1.464 |
| macrophage_unactivated | -0.925 | -0.316 |
| IL1 | -0.673 | -2.029 |
| Rapamycin | -0.055 | -0.988 |
| Tcell | 0.205 | -0.215 |
| GMCSF | 0.0 | -0.544 |
| IFNab | -0.952 | -0.2 |
| IFNg | -1.029 | -1.438 |
| IFNg_GMCSF1 | -1.1 | -2.85 |
| Rv1432_day32 | 0.0 | -0.314 |
| Rv1565c_day32 | 0.264 | 2.132 |
| secA2_input | -0.127 | -2.134 |
| delta_Rv3594 | 2.463 | 3.706 |
| delta_Rv3717 | 1.777 | 2.44 |
| delta_Rv3811 | 1.581 | 2.235 |
| delta_Rv0954 | 2.197 | 2.571 |
| PonA1 | 1.944 | 0.794 |
| EccD1_KO | 0.516 | 0.52 |
| EspI_KO | 0.682 | 0.821 |
| PE35_KO | 0.992 | 1.12 |
| PPE68_KO | 0.032 | 2.259 |
| glycerol2 | 0.552 | 3.174 |
| lignocerate | 0.591 | 2.649 |
| oleate | 0.797 | -2.12 |
| phosphatidylcholine | 1.008 | 2.465 |
| acetate | -0.318 | 4.178 |
| glucAc | 0.135 | 3.653 |
| Rv0950ko | -1.36 | -1.167 |
| Rv1096ko | -2.778 | -0.585 |
| Rv3684ko | -1.284 | 0.802 |
| delta_otsA_trehalose | 0.869 | 0.955 |