Top 10 genes with highest correlation to Rv1727/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1228/lpqX | (cc=0.6164) | info on Rv1228/lpqX |
| Rv3060c/- | (cc=0.5399) | info on Rv3060c/- |
| Rv3439c/- | (cc=0.5389) | info on Rv3439c/- |
| Rv1473/- | (cc=0.5338) | info on Rv1473/- |
| Rv2902c/rnhB | (cc=0.5049) | info on Rv2902c/rnhB |
| Rv1992c/ctpG | (cc=0.5016) | info on Rv1992c/ctpG |
| Rv3208A/TB9.4 | (cc=0.4957) | info on Rv3208A/TB9.4 |
| Rv0910/- | (cc=0.4855) | info on Rv0910/- |
| Rv0433/- | (cc=0.4855) | info on Rv0433/- |
| Rv1495/mazF4 | (cc=0.4851) | info on Rv1495/mazF4 |
Correlation of Rv1727/- with Rv1473/-
Normalized LFCs for Rv1727/-:
(description and provenance of datasets)
| Rv1727/- | Rv1473/- | |
| Fe_supp_jason_reseq | 0.027 | 1.664 |
| low_pH_jason_reseq | -0.718 | 0.179 |
| NO_jason_reseq | 0.299 | 0.281 |
| B6_jason_reseq | 1.146 | -0.421 |
| MHCII_jason_reseq | -0.728 | 1.03 |
| Isoniazid02 | 1.101 | -0.141 |
| Rifampicin4 | 0.945 | 0.141 |
| Ethambutol3 | 1.957 | 0.353 |
| Meropenem3 | 0.093 | 0.545 |
| Vancomycin16 | -0.122 | 0.403 |
| Rv2680_day32 | 0.681 | 1.437 |
| H37Rv_KO_MarP | -0.425 | -0.313 |
| hypoxia_3wks | -0.183 | -1.132 |
| hypoxia_6wks | -0.768 | -2.088 |
| glycerol | 0.607 | 2.61 |
| cholesterol | 1.003 | 0.871 |
| AJ | 0.082 | -1.55 |
| Bibs02 | -0.436 | -0.167 |
| Bibs02c | 0.285 | 0.674 |
| BL6 | -0.454 | -1.06 |
| BL6a | 0.27 | 0.057 |
| BXD01 | -0.679 | -1.386 |
| BXD010 | -1.64 | -1.363 |
| BXD011 | -0.903 | -1.165 |
| BXD03 | -0.66 | -1.553 |
| BXD04 | -0.928 | -1.316 |
| BXD05 | -0.021 | -1.055 |
| BXD06 | -1.357 | -1.221 |
| BXD07 | -0.758 | -1.174 |
| BXD08 | -0.38 | -1.527 |
| BXD09 | -0.344 | -1.286 |
| CAST | -0.704 | -1.952 |
| CCcont | -0.845 | 1.227 |
| DS01 | 0.245 | -0.14 |
| DS02 | -0.08 | -1.226 |
| DS04 | -0.327 | -1.192 |
| DS0c | -0.603 | -0.064 |
| GP01 | -1.319 | 0.811 |
| GP02 | 1.424 | -0.603 |
| GP0c | -0.603 | -0.391 |
| NOD | -0.9 | -1.38 |
| NZO | 0.091 | -1.825 |
| PWK | -0.909 | -2.087 |
| H37Rv_KO_CtpC | -1.309 | -0.835 |
| H37Rv_KO_CtpD | 0.914 | 0.173 |
| H37Rv_KO_Rv1272 | -0.461 | -0.942 |
| H37Rv_KO_SugABC | 0.238 | 1.128 |
| H37Rv_KO_MbtN | -0.529 | 0.086 |
| Trans05 | 0.292 | -0.803 |
| macrophage_unactivated | -0.925 | 0.802 |
| IL1 | -0.673 | -1.344 |
| Rapamycin | -0.055 | -0.175 |
| Tcell | 0.205 | -1.004 |
| GMCSF | 0.0 | -0.15 |
| IFNab | -0.952 | -0.348 |
| IFNg | -1.029 | -1.638 |
| IFNg_GMCSF1 | -1.1 | -0.757 |
| Rv1432_day32 | 0.0 | 0.992 |
| Rv1565c_day32 | 0.264 | 1.515 |
| secA2_input | -0.127 | 1.623 |
| delta_Rv3594 | 2.463 | 2.688 |
| delta_Rv3717 | 1.777 | 0.82 |
| delta_Rv3811 | 1.581 | 2.104 |
| delta_Rv0954 | 2.197 | 1.005 |
| PonA1 | 1.944 | 1.445 |
| EccD1_KO | 0.516 | 0.539 |
| EspI_KO | 0.682 | 1.474 |
| PE35_KO | 0.992 | 1.193 |
| PPE68_KO | 0.032 | 1.6 |
| glycerol2 | 0.552 | -0.615 |
| lignocerate | 0.591 | -0.785 |
| oleate | 0.797 | -1.195 |
| phosphatidylcholine | 1.008 | -0.803 |
| acetate | -0.318 | 0.527 |
| glucAc | 0.135 | 0.707 |
| Rv0950ko | -1.36 | -0.932 |
| Rv1096ko | -2.778 | -1.559 |
| Rv3684ko | -1.284 | -1.228 |
| delta_otsA_trehalose | 0.869 | 1.844 |