Top 10 genes with highest correlation to Rv1718/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1403c/- | (cc=0.6247) | info on Rv1403c/- |
| Rv1289/- | (cc=0.6185) | info on Rv1289/- |
| Rv0089/- | (cc=0.5555) | info on Rv0089/- |
| Rv0963c/- | (cc=0.5548) | info on Rv0963c/- |
| Rv0278c/PE_PGRS3 | (cc=0.551) | info on Rv0278c/PE_PGRS3 |
| Rv2426c/- | (cc=0.5476) | info on Rv2426c/- |
| Rv1281c/oppD | (cc=0.5182) | info on Rv1281c/oppD |
| Rv2919c/glnB | (cc=0.5137) | info on Rv2919c/glnB |
| Rv3081/- | (cc=0.5097) | info on Rv3081/- |
| Rv0226c/- | (cc=0.5072) | info on Rv0226c/- |
Correlation of Rv1718/- with Rv0963c/-
Normalized LFCs for Rv1718/-:
(description and provenance of datasets)
| Rv1718/- | Rv0963c/- | |
| Fe_supp_jason_reseq | 0.308 | -0.998 |
| low_pH_jason_reseq | -0.263 | -1.031 |
| NO_jason_reseq | 0.441 | -0.081 |
| B6_jason_reseq | 1.117 | 0.652 |
| MHCII_jason_reseq | 0.368 | -0.415 |
| Isoniazid02 | 0.017 | 0.113 |
| Rifampicin4 | -0.133 | -0.479 |
| Ethambutol3 | -0.338 | -0.308 |
| Meropenem3 | -0.167 | -0.108 |
| Vancomycin16 | -0.196 | 0.47 |
| Rv2680_day32 | -1.001 | -0.045 |
| H37Rv_KO_MarP | -0.048 | 0.532 |
| hypoxia_3wks | -1.105 | -1.587 |
| hypoxia_6wks | -0.374 | -0.831 |
| glycerol | 0.528 | -0.594 |
| cholesterol | 0.943 | -0.226 |
| AJ | -0.264 | 0.419 |
| Bibs02 | 1.484 | 0.585 |
| Bibs02c | 0.411 | 0.068 |
| BL6 | -1.198 | 0.424 |
| BL6a | -0.349 | 0.102 |
| BXD01 | -1.54 | -0.869 |
| BXD010 | 0.777 | 0.042 |
| BXD011 | -1.002 | 0.042 |
| BXD03 | -1.295 | -0.352 |
| BXD04 | -0.491 | -0.28 |
| BXD05 | -1.649 | -0.372 |
| BXD06 | -0.683 | 0.06 |
| BXD07 | -0.739 | -0.791 |
| BXD08 | -0.835 | 0.118 |
| BXD09 | -0.688 | -0.307 |
| CAST | 1.111 | 0.339 |
| CCcont | -0.466 | 0.132 |
| DS01 | 0.941 | 0.18 |
| DS02 | 1.095 | -0.458 |
| DS04 | 0.673 | -0.132 |
| DS0c | 1.259 | 0.896 |
| GP01 | 0.497 | -0.789 |
| GP02 | 0.486 | -0.237 |
| GP0c | -0.801 | -0.7 |
| NOD | -0.543 | 0.918 |
| NZO | 0.663 | 0.35 |
| PWK | -0.361 | 0.398 |
| H37Rv_KO_CtpC | -0.067 | 0.727 |
| H37Rv_KO_CtpD | -0.384 | 0.186 |
| H37Rv_KO_Rv1272 | -0.415 | 0.316 |
| H37Rv_KO_SugABC | -0.273 | 0.273 |
| H37Rv_KO_MbtN | -1.666 | 0.146 |
| Trans05 | 0.807 | 0.456 |
| macrophage_unactivated | -0.761 | -0.716 |
| IL1 | 0.071 | -0.077 |
| Rapamycin | -0.436 | -0.362 |
| Tcell | -1.447 | -0.978 |
| GMCSF | -0.269 | 0.937 |
| IFNab | -0.151 | -0.475 |
| IFNg | -0.762 | -0.446 |
| IFNg_GMCSF1 | -0.848 | -1.442 |
| Rv1432_day32 | -0.185 | -0.67 |
| Rv1565c_day32 | -0.287 | 0.215 |
| secA2_input | -1.11 | -0.379 |
| delta_Rv3594 | 0.211 | 0.694 |
| delta_Rv3717 | -0.473 | 0.35 |
| delta_Rv3811 | -0.269 | 0.162 |
| delta_Rv0954 | -1.105 | -0.152 |
| PonA1 | -1.477 | -0.108 |
| EccD1_KO | 0.289 | 0.345 |
| EspI_KO | 1.802 | 0.71 |
| PE35_KO | 0.916 | 0.636 |
| PPE68_KO | 0.765 | -0.029 |
| glycerol2 | 0.534 | 1.342 |
| lignocerate | 1.818 | 2.081 |
| oleate | -2.789 | -0.296 |
| phosphatidylcholine | 0.985 | 1.342 |
| acetate | 2.095 | 2.103 |
| glucAc | 1.951 | 2.008 |
| Rv0950ko | -0.232 | 0.832 |
| Rv1096ko | 0.853 | 1.062 |
| Rv3684ko | 0.174 | 0.665 |
| delta_otsA_trehalose | 0.363 | 0.423 |