Top 10 genes with highest correlation to Rv1687c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0388c/PPE9 | (cc=0.4302) | info on Rv0388c/PPE9 |
| Rv3334/- | (cc=0.4229) | info on Rv3334/- |
| Rv1055/- | (cc=0.4103) | info on Rv1055/- |
| Rv1459c/- | (cc=0.4046) | info on Rv1459c/- |
| Rv0697/- | (cc=0.3967) | info on Rv0697/- |
| Rv0986/- | (cc=0.3814) | info on Rv0986/- |
| Rv0330c/- | (cc=0.3765) | info on Rv0330c/- |
| Rv0401/- | (cc=0.3661) | info on Rv0401/- |
| Rv0864/moaC2 | (cc=0.3661) | info on Rv0864/moaC2 |
| Rv2848c/cobB | (cc=0.3648) | info on Rv2848c/cobB |
Correlation of Rv1687c/- with Rv3334/-
Normalized LFCs for Rv1687c/-:
(description and provenance of datasets)
| Rv1687c/- | Rv3334/- | |
| Fe_supp_jason_reseq | 0.33 | 0.346 |
| low_pH_jason_reseq | -0.485 | 0.535 |
| NO_jason_reseq | -1.139 | 0.202 |
| B6_jason_reseq | -0.373 | 0.019 |
| MHCII_jason_reseq | -0.581 | 0.075 |
| Isoniazid02 | -0.13 | 0.374 |
| Rifampicin4 | -0.368 | 0.027 |
| Ethambutol3 | -0.185 | -0.161 |
| Meropenem3 | 0.165 | 0.134 |
| Vancomycin16 | 0.077 | 0.345 |
| Rv2680_day32 | -1.406 | -2.671 |
| H37Rv_KO_MarP | 1.225 | 1.031 |
| hypoxia_3wks | 1.16 | 0.762 |
| hypoxia_6wks | 0.497 | -0.443 |
| glycerol | 0.765 | -1.295 |
| cholesterol | 0.832 | -0.753 |
| AJ | -0.619 | 0.254 |
| Bibs02 | -0.228 | 0.785 |
| Bibs02c | 0.206 | -0.809 |
| BL6 | -0.178 | -0.059 |
| BL6a | -0.215 | -0.057 |
| BXD01 | -0.373 | 0.115 |
| BXD010 | 0.143 | 0.309 |
| BXD011 | -0.159 | 0.325 |
| BXD03 | -0.742 | 0.038 |
| BXD04 | -0.878 | -0.014 |
| BXD05 | -0.019 | 0.112 |
| BXD06 | -0.04 | -0.272 |
| BXD07 | -0.66 | 0.309 |
| BXD08 | -0.573 | -0.224 |
| BXD09 | 0.503 | -0.19 |
| CAST | -0.14 | 0.556 |
| CCcont | -0.37 | -0.736 |
| DS01 | 0.64 | 0.548 |
| DS02 | 0.354 | -0.551 |
| DS04 | 1.195 | 0.572 |
| DS0c | 0.512 | 0.074 |
| GP01 | 0.343 | 0.098 |
| GP02 | -1.352 | 0.074 |
| GP0c | -0.423 | -1.215 |
| NOD | 2.738 | 1.902 |
| NZO | -0.059 | 0.25 |
| PWK | 0.509 | 0.894 |
| H37Rv_KO_CtpC | -0.7 | -0.712 |
| H37Rv_KO_CtpD | -0.663 | -1.507 |
| H37Rv_KO_Rv1272 | 0.534 | 0.268 |
| H37Rv_KO_SugABC | -1.312 | -0.624 |
| H37Rv_KO_MbtN | -0.063 | -0.181 |
| Trans05 | 0.522 | 0.516 |
| macrophage_unactivated | 0.874 | -0.107 |
| IL1 | 2.394 | -0.074 |
| Rapamycin | 1.252 | 0.681 |
| Tcell | 1.463 | 0.212 |
| GMCSF | 2.337 | 0.771 |
| IFNab | 1.418 | 0.29 |
| IFNg | 1.563 | 0.575 |
| IFNg_GMCSF1 | 1.537 | 1.625 |
| Rv1432_day32 | -0.232 | -1.454 |
| Rv1565c_day32 | 0.842 | 1.042 |
| secA2_input | -0.628 | -1.586 |
| delta_Rv3594 | -0.33 | 0.514 |
| delta_Rv3717 | 0.445 | 0.49 |
| delta_Rv3811 | 0.199 | 0.416 |
| delta_Rv0954 | -0.756 | 0.525 |
| PonA1 | 1.38 | 0.187 |
| EccD1_KO | -0.25 | 1.266 |
| EspI_KO | 0.679 | 1.169 |
| PE35_KO | -0.965 | 0.391 |
| PPE68_KO | -1.366 | 0.333 |
| glycerol2 | -0.206 | -0.307 |
| lignocerate | -0.425 | -1.102 |
| oleate | -0.044 | 0.347 |
| phosphatidylcholine | -0.134 | 1.318 |
| acetate | -0.078 | -1.77 |
| glucAc | -0.402 | -2.307 |
| Rv0950ko | 0.096 | 0.238 |
| Rv1096ko | 0.63 | 0.317 |
| Rv3684ko | -0.861 | 0.147 |
| delta_otsA_trehalose | 1.047 | 1.149 |