Top 10 genes with highest correlation to Rv1687c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0388c/PPE9 | (cc=0.4302) | info on Rv0388c/PPE9 |
| Rv3334/- | (cc=0.4229) | info on Rv3334/- |
| Rv1055/- | (cc=0.4103) | info on Rv1055/- |
| Rv1459c/- | (cc=0.4046) | info on Rv1459c/- |
| Rv0697/- | (cc=0.3967) | info on Rv0697/- |
| Rv0986/- | (cc=0.3814) | info on Rv0986/- |
| Rv0330c/- | (cc=0.3765) | info on Rv0330c/- |
| Rv0401/- | (cc=0.3661) | info on Rv0401/- |
| Rv0864/moaC2 | (cc=0.3661) | info on Rv0864/moaC2 |
| Rv2848c/cobB | (cc=0.3648) | info on Rv2848c/cobB |
Correlation of Rv1687c/- with Rv1459c/-
Normalized LFCs for Rv1687c/-:
(description and provenance of datasets)
| Rv1687c/- | Rv1459c/- | |
| Fe_supp_jason_reseq | 0.33 | -0.286 |
| low_pH_jason_reseq | -0.485 | -1.007 |
| NO_jason_reseq | -1.139 | -0.958 |
| B6_jason_reseq | -0.373 | 0.038 |
| MHCII_jason_reseq | -0.581 | -0.177 |
| Isoniazid02 | -0.13 | 0.57 |
| Rifampicin4 | -0.368 | -0.812 |
| Ethambutol3 | -0.185 | -0.579 |
| Meropenem3 | 0.165 | -0.393 |
| Vancomycin16 | 0.077 | -0.122 |
| Rv2680_day32 | -1.406 | -0.43 |
| H37Rv_KO_MarP | 1.225 | -0.169 |
| hypoxia_3wks | 1.16 | 0.0 |
| hypoxia_6wks | 0.497 | 0.549 |
| glycerol | 0.765 | 0.282 |
| cholesterol | 0.832 | -0.259 |
| AJ | -0.619 | -0.255 |
| Bibs02 | -0.228 | -0.142 |
| Bibs02c | 0.206 | -1.117 |
| BL6 | -0.178 | -0.869 |
| BL6a | -0.215 | -0.961 |
| BXD01 | -0.373 | -1.348 |
| BXD010 | 0.143 | -0.89 |
| BXD011 | -0.159 | -0.68 |
| BXD03 | -0.742 | -0.827 |
| BXD04 | -0.878 | -0.789 |
| BXD05 | -0.019 | -1.146 |
| BXD06 | -0.04 | -0.852 |
| BXD07 | -0.66 | -1.275 |
| BXD08 | -0.573 | -0.386 |
| BXD09 | 0.503 | -0.937 |
| CAST | -0.14 | 0.068 |
| CCcont | -0.37 | -0.656 |
| DS01 | 0.64 | -0.595 |
| DS02 | 0.354 | 0.246 |
| DS04 | 1.195 | -0.15 |
| DS0c | 0.512 | -0.588 |
| GP01 | 0.343 | 1.153 |
| GP02 | -1.352 | 0.565 |
| GP0c | -0.423 | 0.0 |
| NOD | 2.738 | -0.285 |
| NZO | -0.059 | -0.503 |
| PWK | 0.509 | -0.57 |
| H37Rv_KO_CtpC | -0.7 | -0.606 |
| H37Rv_KO_CtpD | -0.663 | -0.774 |
| H37Rv_KO_Rv1272 | 0.534 | -0.495 |
| H37Rv_KO_SugABC | -1.312 | -1.743 |
| H37Rv_KO_MbtN | -0.063 | 0.821 |
| Trans05 | 0.522 | -0.764 |
| macrophage_unactivated | 0.874 | 0.376 |
| IL1 | 2.394 | 0.552 |
| Rapamycin | 1.252 | 0.638 |
| Tcell | 1.463 | 0.818 |
| GMCSF | 2.337 | 1.127 |
| IFNab | 1.418 | 0.29 |
| IFNg | 1.563 | 0.724 |
| IFNg_GMCSF1 | 1.537 | 0.98 |
| Rv1432_day32 | -0.232 | -0.343 |
| Rv1565c_day32 | 0.842 | -0.359 |
| secA2_input | -0.628 | 0.459 |
| delta_Rv3594 | -0.33 | -0.795 |
| delta_Rv3717 | 0.445 | -0.522 |
| delta_Rv3811 | 0.199 | 0.055 |
| delta_Rv0954 | -0.756 | -0.935 |
| PonA1 | 1.38 | -0.949 |
| EccD1_KO | -0.25 | 0.171 |
| EspI_KO | 0.679 | -1.235 |
| PE35_KO | -0.965 | 0.0 |
| PPE68_KO | -1.366 | 0.083 |
| glycerol2 | -0.206 | -0.663 |
| lignocerate | -0.425 | 0.195 |
| oleate | -0.044 | -1.035 |
| phosphatidylcholine | -0.134 | -0.22 |
| acetate | -0.078 | -0.261 |
| glucAc | -0.402 | -0.344 |
| Rv0950ko | 0.096 | -0.317 |
| Rv1096ko | 0.63 | 0.57 |
| Rv3684ko | -0.861 | -0.619 |
| delta_otsA_trehalose | 1.047 | -0.16 |