Top 10 genes with highest correlation to Rv1687c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0388c/PPE9 | (cc=0.4302) | info on Rv0388c/PPE9 |
| Rv3334/- | (cc=0.4229) | info on Rv3334/- |
| Rv1055/- | (cc=0.4103) | info on Rv1055/- |
| Rv1459c/- | (cc=0.4046) | info on Rv1459c/- |
| Rv0697/- | (cc=0.3967) | info on Rv0697/- |
| Rv0986/- | (cc=0.3814) | info on Rv0986/- |
| Rv0330c/- | (cc=0.3765) | info on Rv0330c/- |
| Rv0401/- | (cc=0.3661) | info on Rv0401/- |
| Rv0864/moaC2 | (cc=0.3661) | info on Rv0864/moaC2 |
| Rv2848c/cobB | (cc=0.3648) | info on Rv2848c/cobB |
Correlation of Rv1687c/- with Rv0388c/PPE9
Normalized LFCs for Rv1687c/-:
(description and provenance of datasets)
| Rv1687c/- | Rv0388c/PPE9 | |
| Fe_supp_jason_reseq | 0.33 | -0.923 |
| low_pH_jason_reseq | -0.485 | -0.979 |
| NO_jason_reseq | -1.139 | -0.486 |
| B6_jason_reseq | -0.373 | -0.156 |
| MHCII_jason_reseq | -0.581 | -0.299 |
| Isoniazid02 | -0.13 | 0.02 |
| Rifampicin4 | -0.368 | 0.717 |
| Ethambutol3 | -0.185 | -0.086 |
| Meropenem3 | 0.165 | 0.332 |
| Vancomycin16 | 0.077 | -0.151 |
| Rv2680_day32 | -1.406 | -2.472 |
| H37Rv_KO_MarP | 1.225 | -0.072 |
| hypoxia_3wks | 1.16 | -0.355 |
| hypoxia_6wks | 0.497 | -0.679 |
| glycerol | 0.765 | -0.762 |
| cholesterol | 0.832 | 0.03 |
| AJ | -0.619 | 1.055 |
| Bibs02 | -0.228 | 0.918 |
| Bibs02c | 0.206 | 0.694 |
| BL6 | -0.178 | -0.721 |
| BL6a | -0.215 | 0.0 |
| BXD01 | -0.373 | 0.704 |
| BXD010 | 0.143 | 0.385 |
| BXD011 | -0.159 | 0.982 |
| BXD03 | -0.742 | 0.083 |
| BXD04 | -0.878 | -0.026 |
| BXD05 | -0.019 | 0.902 |
| BXD06 | -0.04 | -0.133 |
| BXD07 | -0.66 | 0.279 |
| BXD08 | -0.573 | 0.41 |
| BXD09 | 0.503 | 0.233 |
| CAST | -0.14 | 0.711 |
| CCcont | -0.37 | -0.167 |
| DS01 | 0.64 | 1.009 |
| DS02 | 0.354 | 1.457 |
| DS04 | 1.195 | 1.279 |
| DS0c | 0.512 | 0.896 |
| GP01 | 0.343 | -0.466 |
| GP02 | -1.352 | -1.01 |
| GP0c | -0.423 | -1.716 |
| NOD | 2.738 | 2.372 |
| NZO | -0.059 | 0.961 |
| PWK | 0.509 | 0.307 |
| H37Rv_KO_CtpC | -0.7 | 1.467 |
| H37Rv_KO_CtpD | -0.663 | -0.171 |
| H37Rv_KO_Rv1272 | 0.534 | 0.905 |
| H37Rv_KO_SugABC | -1.312 | 1.027 |
| H37Rv_KO_MbtN | -0.063 | 0.557 |
| Trans05 | 0.522 | 0.762 |
| macrophage_unactivated | 0.874 | 0.527 |
| IL1 | 2.394 | 2.002 |
| Rapamycin | 1.252 | 1.82 |
| Tcell | 1.463 | 0.691 |
| GMCSF | 2.337 | 1.196 |
| IFNab | 1.418 | 1.611 |
| IFNg | 1.563 | 0.505 |
| IFNg_GMCSF1 | 1.537 | 0.996 |
| Rv1432_day32 | -0.232 | 0.343 |
| Rv1565c_day32 | 0.842 | 0.0 |
| secA2_input | -0.628 | 0.28 |
| delta_Rv3594 | -0.33 | -1.077 |
| delta_Rv3717 | 0.445 | -2.451 |
| delta_Rv3811 | 0.199 | -1.142 |
| delta_Rv0954 | -0.756 | -0.09 |
| PonA1 | 1.38 | -0.77 |
| EccD1_KO | -0.25 | -0.184 |
| EspI_KO | 0.679 | 0.419 |
| PE35_KO | -0.965 | -0.478 |
| PPE68_KO | -1.366 | -0.899 |
| glycerol2 | -0.206 | -1.135 |
| lignocerate | -0.425 | -0.84 |
| oleate | -0.044 | -0.133 |
| phosphatidylcholine | -0.134 | -0.535 |
| acetate | -0.078 | -0.306 |
| glucAc | -0.402 | -1.076 |
| Rv0950ko | 0.096 | 0.639 |
| Rv1096ko | 0.63 | 0.73 |
| Rv3684ko | -0.861 | 0.891 |
| delta_otsA_trehalose | 1.047 | -0.356 |