Top 10 genes with highest correlation to Rv1646/PE17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2340c/PE_PGRS39 | (cc=0.6331) | info on Rv2340c/PE_PGRS39 |
| Rv0984/moaB2 | (cc=0.6285) | info on Rv0984/moaB2 |
| Rv1182/papA3 | (cc=0.5758) | info on Rv1182/papA3 |
| Rv3607c/folB | (cc=0.5729) | info on Rv3607c/folB |
| Rv0359/- | (cc=0.5596) | info on Rv0359/- |
| Rv2232/ptkA | (cc=0.5586) | info on Rv2232/ptkA |
| Rv3056/dinP | (cc=0.5542) | info on Rv3056/dinP |
| Rv3328c/sigJ | (cc=0.5478) | info on Rv3328c/sigJ |
| Rv0540/- | (cc=0.5406) | info on Rv0540/- |
| Rv0985c/mscL | (cc=0.5406) | info on Rv0985c/mscL |
Correlation of Rv1646/PE17 with Rv3607c/folB
Normalized LFCs for Rv1646/PE17:
(description and provenance of datasets)
| Rv1646/PE17 | Rv3607c/folB | |
| Fe_supp_jason_reseq | 0.358 | 0.35 |
| low_pH_jason_reseq | -0.348 | -0.211 |
| NO_jason_reseq | 0.181 | -0.885 |
| B6_jason_reseq | 0.787 | 1.802 |
| MHCII_jason_reseq | 0.025 | 2.507 |
| Isoniazid02 | 0.661 | -0.627 |
| Rifampicin4 | 0.439 | -0.127 |
| Ethambutol3 | 0.48 | 0.162 |
| Meropenem3 | -0.279 | -0.115 |
| Vancomycin16 | -0.167 | 0.353 |
| Rv2680_day32 | 0.621 | -0.131 |
| H37Rv_KO_MarP | -0.195 | -0.099 |
| hypoxia_3wks | 0.267 | -1.049 |
| hypoxia_6wks | -0.654 | -2.846 |
| glycerol | 0.329 | -1.596 |
| cholesterol | 0.325 | 0.03 |
| AJ | 0.948 | 2.58 |
| Bibs02 | 0.13 | 0.96 |
| Bibs02c | 0.606 | 0.171 |
| BL6 | -0.783 | -2.078 |
| BL6a | 0.445 | 0.042 |
| BXD01 | 0.031 | -0.668 |
| BXD010 | -0.225 | -2.127 |
| BXD011 | -0.667 | -1.261 |
| BXD03 | -0.788 | -2.246 |
| BXD04 | 0.394 | -1.931 |
| BXD05 | -0.054 | -2.101 |
| BXD06 | -0.508 | -1.963 |
| BXD07 | -0.498 | -2.036 |
| BXD08 | 0.082 | -2.209 |
| BXD09 | -0.457 | -2.067 |
| CAST | 1.018 | 0.642 |
| CCcont | -0.333 | -2.48 |
| DS01 | 0.631 | 2.19 |
| DS02 | 0.597 | 0.607 |
| DS04 | 0.396 | 2.171 |
| DS0c | 1.196 | 1.194 |
| GP01 | 0.043 | -1.034 |
| GP02 | 0.312 | -1.382 |
| GP0c | 0.025 | -2.16 |
| NOD | 0.765 | -0.148 |
| NZO | 0.525 | 2.128 |
| PWK | 0.479 | 1.246 |
| H37Rv_KO_CtpC | 0.071 | 0.257 |
| H37Rv_KO_CtpD | -0.623 | -2.104 |
| H37Rv_KO_Rv1272 | -0.306 | -1.745 |
| H37Rv_KO_SugABC | -0.135 | -1.297 |
| H37Rv_KO_MbtN | 0.468 | -1.609 |
| Trans05 | -0.072 | -2.17 |
| macrophage_unactivated | -0.729 | -3.156 |
| IL1 | -1.103 | -3.746 |
| Rapamycin | -1.264 | -3.876 |
| Tcell | -0.026 | -4.115 |
| GMCSF | -0.855 | -3.335 |
| IFNab | -1.403 | -3.818 |
| IFNg | -1.213 | -3.375 |
| IFNg_GMCSF1 | -0.698 | -2.445 |
| Rv1432_day32 | -0.339 | 0.0 |
| Rv1565c_day32 | -0.488 | -0.218 |
| secA2_input | -0.067 | -1.349 |
| delta_Rv3594 | 0.219 | 2.424 |
| delta_Rv3717 | -0.447 | 2.112 |
| delta_Rv3811 | 0.089 | 1.878 |
| delta_Rv0954 | -0.167 | 3.781 |
| PonA1 | 0.194 | 1.773 |
| EccD1_KO | 0.49 | 0.704 |
| EspI_KO | 0.351 | 1.831 |
| PE35_KO | 0.397 | -0.939 |
| PPE68_KO | 0.873 | -0.189 |
| glycerol2 | 0.573 | -0.39 |
| lignocerate | 0.32 | -1.308 |
| oleate | 0.763 | -0.105 |
| phosphatidylcholine | 0.882 | -0.95 |
| acetate | -0.253 | -1.127 |
| glucAc | -0.363 | -1.566 |
| Rv0950ko | 0.606 | -1.037 |
| Rv1096ko | -0.817 | -1.037 |
| Rv3684ko | -0.321 | 0.0 |
| delta_otsA_trehalose | -1.123 | -0.366 |