Top 10 genes with highest correlation to Rv1646/PE17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2340c/PE_PGRS39 | (cc=0.6331) | info on Rv2340c/PE_PGRS39 |
| Rv0984/moaB2 | (cc=0.6285) | info on Rv0984/moaB2 |
| Rv1182/papA3 | (cc=0.5758) | info on Rv1182/papA3 |
| Rv3607c/folB | (cc=0.5729) | info on Rv3607c/folB |
| Rv0359/- | (cc=0.5596) | info on Rv0359/- |
| Rv2232/ptkA | (cc=0.5586) | info on Rv2232/ptkA |
| Rv3056/dinP | (cc=0.5542) | info on Rv3056/dinP |
| Rv3328c/sigJ | (cc=0.5478) | info on Rv3328c/sigJ |
| Rv0540/- | (cc=0.5406) | info on Rv0540/- |
| Rv0985c/mscL | (cc=0.5406) | info on Rv0985c/mscL |
Correlation of Rv1646/PE17 with Rv0984/moaB2
Normalized LFCs for Rv1646/PE17:
(description and provenance of datasets)
| Rv1646/PE17 | Rv0984/moaB2 | |
| Fe_supp_jason_reseq | 0.358 | 2.846 |
| low_pH_jason_reseq | -0.348 | -0.428 |
| NO_jason_reseq | 0.181 | 0.0 |
| B6_jason_reseq | 0.787 | 1.747 |
| MHCII_jason_reseq | 0.025 | 1.01 |
| Isoniazid02 | 0.661 | 0.298 |
| Rifampicin4 | 0.439 | -0.152 |
| Ethambutol3 | 0.48 | -0.098 |
| Meropenem3 | -0.279 | 0.41 |
| Vancomycin16 | -0.167 | -0.021 |
| Rv2680_day32 | 0.621 | 1.149 |
| H37Rv_KO_MarP | -0.195 | 0.793 |
| hypoxia_3wks | 0.267 | 0.411 |
| hypoxia_6wks | -0.654 | -0.071 |
| glycerol | 0.329 | 0.503 |
| cholesterol | 0.325 | -0.114 |
| AJ | 0.948 | -0.044 |
| Bibs02 | 0.13 | 0.181 |
| Bibs02c | 0.606 | -0.52 |
| BL6 | -0.783 | -0.782 |
| BL6a | 0.445 | -0.903 |
| BXD01 | 0.031 | -0.844 |
| BXD010 | -0.225 | -1.868 |
| BXD011 | -0.667 | -1.407 |
| BXD03 | -0.788 | -1.531 |
| BXD04 | 0.394 | -1.169 |
| BXD05 | -0.054 | -1.475 |
| BXD06 | -0.508 | -1.463 |
| BXD07 | -0.498 | -1.256 |
| BXD08 | 0.082 | -1.544 |
| BXD09 | -0.457 | -1.296 |
| CAST | 1.018 | -0.15 |
| CCcont | -0.333 | -1.719 |
| DS01 | 0.631 | -0.352 |
| DS02 | 0.597 | 0.113 |
| DS04 | 0.396 | 0.114 |
| DS0c | 1.196 | 0.203 |
| GP01 | 0.043 | -1.833 |
| GP02 | 0.312 | 0.673 |
| GP0c | 0.025 | -1.831 |
| NOD | 0.765 | 0.104 |
| NZO | 0.525 | -0.998 |
| PWK | 0.479 | -0.558 |
| H37Rv_KO_CtpC | 0.071 | -0.693 |
| H37Rv_KO_CtpD | -0.623 | -3.93 |
| H37Rv_KO_Rv1272 | -0.306 | -0.317 |
| H37Rv_KO_SugABC | -0.135 | -2.356 |
| H37Rv_KO_MbtN | 0.468 | 0.035 |
| Trans05 | -0.072 | -1.69 |
| macrophage_unactivated | -0.729 | -5.3 |
| IL1 | -1.103 | -4.663 |
| Rapamycin | -1.264 | -3.652 |
| Tcell | -0.026 | -4.493 |
| GMCSF | -0.855 | -3.44 |
| IFNab | -1.403 | -5.424 |
| IFNg | -1.213 | -4.525 |
| IFNg_GMCSF1 | -0.698 | -5.455 |
| Rv1432_day32 | -0.339 | 0.107 |
| Rv1565c_day32 | -0.488 | -1.003 |
| secA2_input | -0.067 | 0.98 |
| delta_Rv3594 | 0.219 | 1.355 |
| delta_Rv3717 | -0.447 | -1.133 |
| delta_Rv3811 | 0.089 | 0.385 |
| delta_Rv0954 | -0.167 | 1.774 |
| PonA1 | 0.194 | 0.871 |
| EccD1_KO | 0.49 | 0.339 |
| EspI_KO | 0.351 | 1.743 |
| PE35_KO | 0.397 | 0.823 |
| PPE68_KO | 0.873 | 1.83 |
| glycerol2 | 0.573 | 0.811 |
| lignocerate | 0.32 | -0.329 |
| oleate | 0.763 | -0.216 |
| phosphatidylcholine | 0.882 | 0.494 |
| acetate | -0.253 | -0.574 |
| glucAc | -0.363 | -1.251 |
| Rv0950ko | 0.606 | -0.654 |
| Rv1096ko | -0.817 | -1.372 |
| Rv3684ko | -0.321 | -0.321 |
| delta_otsA_trehalose | -1.123 | 0.407 |