Top 10 genes with highest correlation to Rv1646/PE17:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2340c/PE_PGRS39 | (cc=0.6331) | info on Rv2340c/PE_PGRS39 |
| Rv0984/moaB2 | (cc=0.6285) | info on Rv0984/moaB2 |
| Rv1182/papA3 | (cc=0.5758) | info on Rv1182/papA3 |
| Rv3607c/folB | (cc=0.5729) | info on Rv3607c/folB |
| Rv0359/- | (cc=0.5596) | info on Rv0359/- |
| Rv2232/ptkA | (cc=0.5586) | info on Rv2232/ptkA |
| Rv3056/dinP | (cc=0.5542) | info on Rv3056/dinP |
| Rv3328c/sigJ | (cc=0.5478) | info on Rv3328c/sigJ |
| Rv0540/- | (cc=0.5406) | info on Rv0540/- |
| Rv0985c/mscL | (cc=0.5406) | info on Rv0985c/mscL |
Correlation of Rv1646/PE17 with Rv2232/ptkA
Normalized LFCs for Rv1646/PE17:
(description and provenance of datasets)
| Rv1646/PE17 | Rv2232/ptkA | |
| Fe_supp_jason_reseq | 0.358 | -1.782 |
| low_pH_jason_reseq | -0.348 | -0.626 |
| NO_jason_reseq | 0.181 | 0.108 |
| B6_jason_reseq | 0.787 | 0.489 |
| MHCII_jason_reseq | 0.025 | 1.444 |
| Isoniazid02 | 0.661 | 0.455 |
| Rifampicin4 | 0.439 | -0.439 |
| Ethambutol3 | 0.48 | 0.638 |
| Meropenem3 | -0.279 | 1.542 |
| Vancomycin16 | -0.167 | -0.43 |
| Rv2680_day32 | 0.621 | 0.947 |
| H37Rv_KO_MarP | -0.195 | 1.226 |
| hypoxia_3wks | 0.267 | 0.112 |
| hypoxia_6wks | -0.654 | -0.311 |
| glycerol | 0.329 | 1.271 |
| cholesterol | 0.325 | 0.0 |
| AJ | 0.948 | 0.156 |
| Bibs02 | 0.13 | 0.588 |
| Bibs02c | 0.606 | 1.441 |
| BL6 | -0.783 | -2.396 |
| BL6a | 0.445 | 0.209 |
| BXD01 | 0.031 | -0.608 |
| BXD010 | -0.225 | -1.641 |
| BXD011 | -0.667 | -0.741 |
| BXD03 | -0.788 | -2.017 |
| BXD04 | 0.394 | 0.131 |
| BXD05 | -0.054 | -0.462 |
| BXD06 | -0.508 | -0.335 |
| BXD07 | -0.498 | -0.448 |
| BXD08 | 0.082 | -0.357 |
| BXD09 | -0.457 | -1.346 |
| CAST | 1.018 | 0.517 |
| CCcont | -0.333 | -2.063 |
| DS01 | 0.631 | 0.71 |
| DS02 | 0.597 | 0.654 |
| DS04 | 0.396 | 0.583 |
| DS0c | 1.196 | 0.06 |
| GP01 | 0.043 | -0.164 |
| GP02 | 0.312 | 0.648 |
| GP0c | 0.025 | -0.421 |
| NOD | 0.765 | 0.604 |
| NZO | 0.525 | 0.309 |
| PWK | 0.479 | -0.492 |
| H37Rv_KO_CtpC | 0.071 | -0.466 |
| H37Rv_KO_CtpD | -0.623 | -1.686 |
| H37Rv_KO_Rv1272 | -0.306 | -0.257 |
| H37Rv_KO_SugABC | -0.135 | 0.529 |
| H37Rv_KO_MbtN | 0.468 | -1.024 |
| Trans05 | -0.072 | -2.026 |
| macrophage_unactivated | -0.729 | -3.592 |
| IL1 | -1.103 | -4.547 |
| Rapamycin | -1.264 | -3.67 |
| Tcell | -0.026 | -2.401 |
| GMCSF | -0.855 | -2.572 |
| IFNab | -1.403 | -2.098 |
| IFNg | -1.213 | -2.603 |
| IFNg_GMCSF1 | -0.698 | -2.181 |
| Rv1432_day32 | -0.339 | 1.119 |
| Rv1565c_day32 | -0.488 | -0.24 |
| secA2_input | -0.067 | 0.969 |
| delta_Rv3594 | 0.219 | -1.048 |
| delta_Rv3717 | -0.447 | -0.394 |
| delta_Rv3811 | 0.089 | -0.498 |
| delta_Rv0954 | -0.167 | -1.16 |
| PonA1 | 0.194 | 0.227 |
| EccD1_KO | 0.49 | -0.388 |
| EspI_KO | 0.351 | 1.8 |
| PE35_KO | 0.397 | -0.254 |
| PPE68_KO | 0.873 | 0.749 |
| glycerol2 | 0.573 | -1.354 |
| lignocerate | 0.32 | -1.695 |
| oleate | 0.763 | -0.315 |
| phosphatidylcholine | 0.882 | -1.217 |
| acetate | -0.253 | -1.445 |
| glucAc | -0.363 | -1.306 |
| Rv0950ko | 0.606 | 0.078 |
| Rv1096ko | -0.817 | -0.793 |
| Rv3684ko | -0.321 | 0.0 |
| delta_otsA_trehalose | -1.123 | 0.83 |