Top 10 genes with highest correlation to Rv1604/impA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3421c/- | (cc=0.5959) | info on Rv3421c/- |
| Rv3232c/ppk2 | (cc=0.5911) | info on Rv3232c/ppk2 |
| Rv3146/nuoB | (cc=0.5908) | info on Rv3146/nuoB |
| Rv3150/nuoF | (cc=0.5887) | info on Rv3150/nuoF |
| Rv0055/rpsR1 | (cc=0.5864) | info on Rv0055/rpsR1 |
| Rv3149/nuoE | (cc=0.5737) | info on Rv3149/nuoE |
| Rv0508/- | (cc=0.5703) | info on Rv0508/- |
| Rv2575/- | (cc=0.5666) | info on Rv2575/- |
| Rv3152/nuoH | (cc=0.5598) | info on Rv3152/nuoH |
| Rv3148/nuoD | (cc=0.5465) | info on Rv3148/nuoD |
Correlation of Rv1604/impA with Rv3150/nuoF
Normalized LFCs for Rv1604/impA:
(description and provenance of datasets)
| Rv1604/impA | Rv3150/nuoF | |
| Fe_supp_jason_reseq | -1.397 | -1.514 |
| low_pH_jason_reseq | -0.607 | -0.313 |
| NO_jason_reseq | -0.953 | -0.252 |
| B6_jason_reseq | -0.616 | -1.087 |
| MHCII_jason_reseq | -1.057 | -1.509 |
| Isoniazid02 | 0.134 | 0.611 |
| Rifampicin4 | 0.482 | 0.282 |
| Ethambutol3 | 0.191 | -0.595 |
| Meropenem3 | 0.31 | -0.847 |
| Vancomycin16 | 0.183 | -0.196 |
| Rv2680_day32 | -1.187 | 0.266 |
| H37Rv_KO_MarP | -0.351 | -0.246 |
| hypoxia_3wks | 0.439 | 1.097 |
| hypoxia_6wks | 0.0 | 0.754 |
| glycerol | 0.275 | -0.471 |
| cholesterol | 1.006 | -0.216 |
| AJ | 0.193 | -0.983 |
| Bibs02 | -0.697 | 0.55 |
| Bibs02c | 0.965 | -0.23 |
| BL6 | 1.53 | 1.845 |
| BL6a | 1.092 | 2.251 |
| BXD01 | 1.839 | 1.864 |
| BXD010 | 1.381 | 2.266 |
| BXD011 | 1.175 | 2.05 |
| BXD03 | 1.037 | 2.177 |
| BXD04 | 1.619 | 2.337 |
| BXD05 | 1.795 | 2.126 |
| BXD06 | 1.149 | 2.045 |
| BXD07 | 1.463 | 2.3 |
| BXD08 | 1.697 | 2.274 |
| BXD09 | 1.227 | 2.374 |
| CAST | 0.537 | 0.506 |
| CCcont | 1.743 | 1.451 |
| DS01 | -0.216 | 0.583 |
| DS02 | -0.34 | 0.147 |
| DS04 | -1.405 | 0.426 |
| DS0c | -0.129 | 0.969 |
| GP01 | -0.508 | 0.715 |
| GP02 | 0.871 | 0.875 |
| GP0c | 0.209 | 1.092 |
| NOD | 0.065 | -0.838 |
| NZO | 1.357 | 0.38 |
| PWK | -0.374 | -0.142 |
| H37Rv_KO_CtpC | 1.611 | 1.463 |
| H37Rv_KO_CtpD | 1.152 | 2.661 |
| H37Rv_KO_Rv1272 | -0.174 | 1.929 |
| H37Rv_KO_SugABC | 1.77 | 1.426 |
| H37Rv_KO_MbtN | -0.437 | 1.537 |
| Trans05 | 0.449 | 1.798 |
| macrophage_unactivated | -0.051 | 0.284 |
| IL1 | -0.098 | 0.267 |
| Rapamycin | -1.062 | 0.365 |
| Tcell | -0.27 | 0.746 |
| GMCSF | -0.652 | 0.388 |
| IFNab | 0.42 | 1.69 |
| IFNg | -0.711 | -0.302 |
| IFNg_GMCSF1 | -0.657 | 0.145 |
| Rv1432_day32 | 0.681 | 0.568 |
| Rv1565c_day32 | 0.381 | -0.208 |
| secA2_input | -0.146 | -0.116 |
| delta_Rv3594 | -0.707 | 0.392 |
| delta_Rv3717 | -1.091 | 0.299 |
| delta_Rv3811 | 0.134 | 0.094 |
| delta_Rv0954 | -0.963 | -0.057 |
| PonA1 | -0.261 | -0.39 |
| EccD1_KO | -0.523 | -0.474 |
| EspI_KO | -0.453 | -0.177 |
| PE35_KO | -0.178 | -0.467 |
| PPE68_KO | -0.618 | 0.0 |
| glycerol2 | 0.614 | 1.866 |
| lignocerate | 1.294 | -0.192 |
| oleate | 0.621 | 2.076 |
| phosphatidylcholine | 1.053 | -0.221 |
| acetate | 1.285 | -0.263 |
| glucAc | 1.143 | 0.587 |
| Rv0950ko | 1.414 | 0.311 |
| Rv1096ko | 1.08 | 0.639 |
| Rv3684ko | 0.35 | 0.098 |
| delta_otsA_trehalose | 1.383 | 0.965 |