Top 10 genes with highest correlation to Rv1516c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1528c/papA4 | (cc=0.5471) | info on Rv1528c/papA4 |
| Rv1453/- | (cc=0.4938) | info on Rv1453/- |
| Rv2915c/- | (cc=0.4726) | info on Rv2915c/- |
| Rv0899/ompA | (cc=0.4622) | info on Rv0899/ompA |
| Rv0802c/- | (cc=0.4612) | info on Rv0802c/- |
| Rv1542c/glbN | (cc=0.4583) | info on Rv1542c/glbN |
| Rv2331/- | (cc=0.4543) | info on Rv2331/- |
| Rv2681/- | (cc=0.4529) | info on Rv2681/- |
| Rv2432c/- | (cc=0.4464) | info on Rv2432c/- |
| Rv2328/PE23 | (cc=0.4391) | info on Rv2328/PE23 |
Correlation of Rv1516c/- with Rv2915c/-
Normalized LFCs for Rv1516c/-:
(description and provenance of datasets)
| Rv1516c/- | Rv2915c/- | |
| Fe_supp_jason_reseq | 0.257 | 0.384 |
| low_pH_jason_reseq | -1.027 | -0.564 |
| NO_jason_reseq | -0.601 | 0.612 |
| B6_jason_reseq | 0.712 | 0.963 |
| MHCII_jason_reseq | 1.498 | 1.18 |
| Isoniazid02 | 0.16 | -0.583 |
| Rifampicin4 | 0.043 | 0.447 |
| Ethambutol3 | 0.259 | -0.488 |
| Meropenem3 | 0.956 | 0.519 |
| Vancomycin16 | 0.085 | -0.255 |
| Rv2680_day32 | -0.913 | -0.528 |
| H37Rv_KO_MarP | 0.294 | 0.073 |
| hypoxia_3wks | -0.116 | 0.742 |
| hypoxia_6wks | -0.152 | 0.651 |
| glycerol | 0.369 | 0.138 |
| cholesterol | -1.422 | 0.216 |
| AJ | -0.044 | 0.709 |
| Bibs02 | 0.244 | -0.307 |
| Bibs02c | 0.75 | 0.365 |
| BL6 | -0.401 | -0.887 |
| BL6a | -0.057 | 0.059 |
| BXD01 | -0.383 | -0.79 |
| BXD010 | 0.048 | -0.556 |
| BXD011 | 0.376 | 0.133 |
| BXD03 | 0.448 | 0.092 |
| BXD04 | -0.073 | -0.386 |
| BXD05 | 0.84 | -0.014 |
| BXD06 | 0.109 | -0.305 |
| BXD07 | 0.339 | -0.828 |
| BXD08 | 0.494 | -0.185 |
| BXD09 | -0.041 | -0.375 |
| CAST | 0.365 | 0.24 |
| CCcont | -0.229 | -0.636 |
| DS01 | 0.648 | 0.52 |
| DS02 | -0.613 | 0.581 |
| DS04 | 1.45 | 0.356 |
| DS0c | 1.026 | 0.63 |
| GP01 | -2.127 | -1.518 |
| GP02 | -2.085 | -0.406 |
| GP0c | -2.068 | -1.971 |
| NOD | 0.835 | 0.099 |
| NZO | 0.396 | 0.144 |
| PWK | 0.523 | -0.05 |
| H37Rv_KO_CtpC | -0.031 | -0.644 |
| H37Rv_KO_CtpD | -0.037 | -1.357 |
| H37Rv_KO_Rv1272 | -0.452 | -0.287 |
| H37Rv_KO_SugABC | -1.576 | -0.264 |
| H37Rv_KO_MbtN | -0.04 | -1.728 |
| Trans05 | 0.717 | -0.481 |
| macrophage_unactivated | 0.035 | -0.578 |
| IL1 | -0.753 | 0.101 |
| Rapamycin | -0.74 | -0.681 |
| Tcell | -0.658 | -1.049 |
| GMCSF | 0.227 | -0.483 |
| IFNab | -0.571 | -0.846 |
| IFNg | -0.54 | -0.326 |
| IFNg_GMCSF1 | 0.104 | -0.154 |
| Rv1432_day32 | -0.442 | 0.562 |
| Rv1565c_day32 | 1.218 | 0.088 |
| secA2_input | 1.902 | 0.42 |
| delta_Rv3594 | -1.133 | -1.623 |
| delta_Rv3717 | -0.669 | -0.853 |
| delta_Rv3811 | -0.763 | -0.355 |
| delta_Rv0954 | 0.979 | -1.072 |
| PonA1 | -0.08 | -0.479 |
| EccD1_KO | 0.118 | 0.674 |
| EspI_KO | 0.491 | 1.352 |
| PE35_KO | 1.076 | 1.21 |
| PPE68_KO | 1.043 | 1.03 |
| glycerol2 | -0.154 | -0.151 |
| lignocerate | 0.677 | -0.574 |
| oleate | 0.0 | 0.349 |
| phosphatidylcholine | 0.497 | -0.021 |
| acetate | 0.851 | -0.331 |
| glucAc | 0.662 | -1.08 |
| Rv0950ko | -0.458 | -0.905 |
| Rv1096ko | -0.404 | -0.624 |
| Rv3684ko | 0.593 | -0.396 |
| delta_otsA_trehalose | 1.161 | -0.235 |