Top 10 genes with highest correlation to Rv1516c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1528c/papA4 | (cc=0.5471) | info on Rv1528c/papA4 |
| Rv1453/- | (cc=0.4938) | info on Rv1453/- |
| Rv2915c/- | (cc=0.4726) | info on Rv2915c/- |
| Rv0899/ompA | (cc=0.4622) | info on Rv0899/ompA |
| Rv0802c/- | (cc=0.4612) | info on Rv0802c/- |
| Rv1542c/glbN | (cc=0.4583) | info on Rv1542c/glbN |
| Rv2331/- | (cc=0.4543) | info on Rv2331/- |
| Rv2681/- | (cc=0.4529) | info on Rv2681/- |
| Rv2432c/- | (cc=0.4464) | info on Rv2432c/- |
| Rv2328/PE23 | (cc=0.4391) | info on Rv2328/PE23 |
Correlation of Rv1516c/- with Rv1453/-
Normalized LFCs for Rv1516c/-:
(description and provenance of datasets)
| Rv1516c/- | Rv1453/- | |
| Fe_supp_jason_reseq | 0.257 | 0.72 |
| low_pH_jason_reseq | -1.027 | 0.659 |
| NO_jason_reseq | -0.601 | -0.672 |
| B6_jason_reseq | 0.712 | 2.065 |
| MHCII_jason_reseq | 1.498 | 1.373 |
| Isoniazid02 | 0.16 | 1.302 |
| Rifampicin4 | 0.043 | 0.219 |
| Ethambutol3 | 0.259 | 0.876 |
| Meropenem3 | 0.956 | 0.7 |
| Vancomycin16 | 0.085 | 0.114 |
| Rv2680_day32 | -0.913 | 0.241 |
| H37Rv_KO_MarP | 0.294 | 0.793 |
| hypoxia_3wks | -0.116 | 0.905 |
| hypoxia_6wks | -0.152 | 1.054 |
| glycerol | 0.369 | -0.025 |
| cholesterol | -1.422 | -0.156 |
| AJ | -0.044 | 0.35 |
| Bibs02 | 0.244 | 0.738 |
| Bibs02c | 0.75 | 0.526 |
| BL6 | -0.401 | -1.143 |
| BL6a | -0.057 | -0.062 |
| BXD01 | -0.383 | -0.497 |
| BXD010 | 0.048 | -0.054 |
| BXD011 | 0.376 | -0.022 |
| BXD03 | 0.448 | -0.914 |
| BXD04 | -0.073 | -0.5 |
| BXD05 | 0.84 | -0.657 |
| BXD06 | 0.109 | -0.426 |
| BXD07 | 0.339 | -0.491 |
| BXD08 | 0.494 | -0.219 |
| BXD09 | -0.041 | -0.257 |
| CAST | 0.365 | -0.048 |
| CCcont | -0.229 | -1.652 |
| DS01 | 0.648 | 0.818 |
| DS02 | -0.613 | 0.756 |
| DS04 | 1.45 | 1.053 |
| DS0c | 1.026 | 1.053 |
| GP01 | -2.127 | -0.652 |
| GP02 | -2.085 | -1.909 |
| GP0c | -2.068 | -1.531 |
| NOD | 0.835 | 0.251 |
| NZO | 0.396 | 0.152 |
| PWK | 0.523 | 0.436 |
| H37Rv_KO_CtpC | -0.031 | -1.253 |
| H37Rv_KO_CtpD | -0.037 | 0.017 |
| H37Rv_KO_Rv1272 | -0.452 | -0.603 |
| H37Rv_KO_SugABC | -1.576 | -0.68 |
| H37Rv_KO_MbtN | -0.04 | -0.386 |
| Trans05 | 0.717 | -0.9 |
| macrophage_unactivated | 0.035 | -0.78 |
| IL1 | -0.753 | -0.528 |
| Rapamycin | -0.74 | -0.344 |
| Tcell | -0.658 | -0.261 |
| GMCSF | 0.227 | -0.232 |
| IFNab | -0.571 | -0.538 |
| IFNg | -0.54 | -0.794 |
| IFNg_GMCSF1 | 0.104 | -0.119 |
| Rv1432_day32 | -0.442 | 0.072 |
| Rv1565c_day32 | 1.218 | 0.264 |
| secA2_input | 1.902 | 0.41 |
| delta_Rv3594 | -1.133 | -0.118 |
| delta_Rv3717 | -0.669 | -1.099 |
| delta_Rv3811 | -0.763 | 0.079 |
| delta_Rv0954 | 0.979 | -0.846 |
| PonA1 | -0.08 | -0.374 |
| EccD1_KO | 0.118 | 0.503 |
| EspI_KO | 0.491 | -0.151 |
| PE35_KO | 1.076 | 0.277 |
| PPE68_KO | 1.043 | 0.336 |
| glycerol2 | -0.154 | 0.338 |
| lignocerate | 0.677 | 0.073 |
| oleate | 0.0 | 0.525 |
| phosphatidylcholine | 0.497 | 0.43 |
| acetate | 0.851 | -0.136 |
| glucAc | 0.662 | -0.174 |
| Rv0950ko | -0.458 | -0.32 |
| Rv1096ko | -0.404 | -0.787 |
| Rv3684ko | 0.593 | -0.331 |
| delta_otsA_trehalose | 1.161 | 1.851 |