Top 10 genes with highest correlation to Rv1516c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1528c/papA4 | (cc=0.5471) | info on Rv1528c/papA4 |
| Rv1453/- | (cc=0.4938) | info on Rv1453/- |
| Rv2915c/- | (cc=0.4726) | info on Rv2915c/- |
| Rv0899/ompA | (cc=0.4622) | info on Rv0899/ompA |
| Rv0802c/- | (cc=0.4612) | info on Rv0802c/- |
| Rv1542c/glbN | (cc=0.4583) | info on Rv1542c/glbN |
| Rv2331/- | (cc=0.4543) | info on Rv2331/- |
| Rv2681/- | (cc=0.4529) | info on Rv2681/- |
| Rv2432c/- | (cc=0.4464) | info on Rv2432c/- |
| Rv2328/PE23 | (cc=0.4391) | info on Rv2328/PE23 |
Correlation of Rv1516c/- with Rv2681/-
Normalized LFCs for Rv1516c/-:
(description and provenance of datasets)
| Rv1516c/- | Rv2681/- | |
| Fe_supp_jason_reseq | 0.257 | 1.628 |
| low_pH_jason_reseq | -1.027 | 0.102 |
| NO_jason_reseq | -0.601 | -1.494 |
| B6_jason_reseq | 0.712 | -1.794 |
| MHCII_jason_reseq | 1.498 | 0.06 |
| Isoniazid02 | 0.16 | 1.116 |
| Rifampicin4 | 0.043 | 0.0 |
| Ethambutol3 | 0.259 | -0.528 |
| Meropenem3 | 0.956 | 0.074 |
| Vancomycin16 | 0.085 | -1.804 |
| Rv2680_day32 | -0.913 | -0.971 |
| H37Rv_KO_MarP | 0.294 | 1.769 |
| hypoxia_3wks | -0.116 | -0.969 |
| hypoxia_6wks | -0.152 | -1.355 |
| glycerol | 0.369 | 1.17 |
| cholesterol | -1.422 | -0.141 |
| AJ | -0.044 | -0.901 |
| Bibs02 | 0.244 | -0.624 |
| Bibs02c | 0.75 | -0.873 |
| BL6 | -0.401 | -2.702 |
| BL6a | -0.057 | -1.543 |
| BXD01 | -0.383 | -3.117 |
| BXD010 | 0.048 | -3.065 |
| BXD011 | 0.376 | -2.752 |
| BXD03 | 0.448 | -2.921 |
| BXD04 | -0.073 | -2.49 |
| BXD05 | 0.84 | -2.979 |
| BXD06 | 0.109 | -3.285 |
| BXD07 | 0.339 | -3.407 |
| BXD08 | 0.494 | -3.273 |
| BXD09 | -0.041 | -3.274 |
| CAST | 0.365 | -0.125 |
| CCcont | -0.229 | -1.248 |
| DS01 | 0.648 | 0.713 |
| DS02 | -0.613 | 1.419 |
| DS04 | 1.45 | 0.914 |
| DS0c | 1.026 | 0.369 |
| GP01 | -2.127 | -2.66 |
| GP02 | -2.085 | -2.4 |
| GP0c | -2.068 | -3.503 |
| NOD | 0.835 | -0.029 |
| NZO | 0.396 | -1.342 |
| PWK | 0.523 | 0.473 |
| H37Rv_KO_CtpC | -0.031 | -1.589 |
| H37Rv_KO_CtpD | -0.037 | -0.579 |
| H37Rv_KO_Rv1272 | -0.452 | -2.354 |
| H37Rv_KO_SugABC | -1.576 | -1.995 |
| H37Rv_KO_MbtN | -0.04 | -2.226 |
| Trans05 | 0.717 | -2.413 |
| macrophage_unactivated | 0.035 | -2.702 |
| IL1 | -0.753 | -3.197 |
| Rapamycin | -0.74 | -2.627 |
| Tcell | -0.658 | -2.789 |
| GMCSF | 0.227 | -3.063 |
| IFNab | -0.571 | -3.773 |
| IFNg | -0.54 | -3.1 |
| IFNg_GMCSF1 | 0.104 | -2.275 |
| Rv1432_day32 | -0.442 | -2.117 |
| Rv1565c_day32 | 1.218 | 0.625 |
| secA2_input | 1.902 | 0.518 |
| delta_Rv3594 | -1.133 | -2.518 |
| delta_Rv3717 | -0.669 | -3.253 |
| delta_Rv3811 | -0.763 | -2.858 |
| delta_Rv0954 | 0.979 | -0.079 |
| PonA1 | -0.08 | 0.705 |
| EccD1_KO | 0.118 | -0.066 |
| EspI_KO | 0.491 | 0.217 |
| PE35_KO | 1.076 | 0.432 |
| PPE68_KO | 1.043 | -0.39 |
| glycerol2 | -0.154 | 0.863 |
| lignocerate | 0.677 | -0.242 |
| oleate | 0.0 | -0.846 |
| phosphatidylcholine | 0.497 | 0.731 |
| acetate | 0.851 | 0.15 |
| glucAc | 0.662 | 1.115 |
| Rv0950ko | -0.458 | -0.482 |
| Rv1096ko | -0.404 | -0.57 |
| Rv3684ko | 0.593 | -0.91 |
| delta_otsA_trehalose | 1.161 | 1.041 |