Top 10 genes with highest correlation to Rv1514c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1182/papA3 | (cc=0.6036) | info on Rv1182/papA3 |
| Rv1541c/lprI | (cc=0.5843) | info on Rv1541c/lprI |
| Rv0634c/- | (cc=0.5816) | info on Rv0634c/- |
| Rv0910/- | (cc=0.5808) | info on Rv0910/- |
| Rv1221/sigE | (cc=0.5759) | info on Rv1221/sigE |
| Rv1281c/oppD | (cc=0.5692) | info on Rv1281c/oppD |
| Rv1653/argJ | (cc=0.5689) | info on Rv1653/argJ |
| Rv1708/- | (cc=0.5681) | info on Rv1708/- |
| Rv1118c/- | (cc=0.5506) | info on Rv1118c/- |
| Rv1251c/- | (cc=0.5402) | info on Rv1251c/- |
Correlation of Rv1514c/- with Rv1221/sigE
Normalized LFCs for Rv1514c/-:
(description and provenance of datasets)
| Rv1514c/- | Rv1221/sigE | |
| Fe_supp_jason_reseq | 1.347 | 2.602 |
| low_pH_jason_reseq | 0.361 | 0.156 |
| NO_jason_reseq | 0.772 | 0.895 |
| B6_jason_reseq | 1.724 | 0.752 |
| MHCII_jason_reseq | 1.487 | 1.311 |
| Isoniazid02 | -0.621 | 0.682 |
| Rifampicin4 | -0.422 | 0.146 |
| Ethambutol3 | 0.975 | -0.646 |
| Meropenem3 | -0.187 | -0.212 |
| Vancomycin16 | -0.414 | -0.305 |
| Rv2680_day32 | -0.803 | 0.651 |
| H37Rv_KO_MarP | 0.721 | -0.313 |
| hypoxia_3wks | 0.199 | -0.128 |
| hypoxia_6wks | -0.455 | -1.495 |
| glycerol | 0.989 | -0.967 |
| cholesterol | 0.095 | -0.197 |
| AJ | 0.432 | -0.373 |
| Bibs02 | 0.277 | -0.698 |
| Bibs02c | 0.593 | -0.39 |
| BL6 | -0.088 | -1.107 |
| BL6a | -0.11 | -0.472 |
| BXD01 | -0.534 | -0.58 |
| BXD010 | -0.356 | -0.749 |
| BXD011 | -0.354 | -1.333 |
| BXD03 | -0.697 | -0.79 |
| BXD04 | -0.666 | -1.035 |
| BXD05 | -0.175 | 0.33 |
| BXD06 | -0.602 | -0.832 |
| BXD07 | -0.117 | -1.713 |
| BXD08 | -0.876 | -1.392 |
| BXD09 | -0.272 | -0.374 |
| CAST | -0.37 | -1.927 |
| CCcont | 0.079 | -0.397 |
| DS01 | 0.094 | 0.286 |
| DS02 | 0.25 | -0.35 |
| DS04 | 1.03 | -0.929 |
| DS0c | 0.379 | -0.193 |
| GP01 | 0.014 | -1.292 |
| GP02 | -1.422 | -0.92 |
| GP0c | -0.924 | -1.702 |
| NOD | 0.542 | -1.487 |
| NZO | -0.199 | -1.669 |
| PWK | -0.054 | -1.147 |
| H37Rv_KO_CtpC | -1.154 | -1.359 |
| H37Rv_KO_CtpD | 0.067 | -0.113 |
| H37Rv_KO_Rv1272 | -0.759 | -1.846 |
| H37Rv_KO_SugABC | 0.077 | -1.159 |
| H37Rv_KO_MbtN | -0.465 | -0.459 |
| Trans05 | 0.243 | 0.23 |
| macrophage_unactivated | -0.486 | 0.202 |
| IL1 | 0.525 | -0.629 |
| Rapamycin | 0.187 | -0.424 |
| Tcell | -0.209 | -1.212 |
| GMCSF | -0.795 | -0.269 |
| IFNab | -0.193 | -0.641 |
| IFNg | 0.569 | -0.994 |
| IFNg_GMCSF1 | 0.377 | -2.049 |
| Rv1432_day32 | -0.902 | -0.139 |
| Rv1565c_day32 | 0.223 | 0.158 |
| secA2_input | -1.154 | -0.931 |
| delta_Rv3594 | 1.244 | 0.057 |
| delta_Rv3717 | 0.048 | -0.736 |
| delta_Rv3811 | 0.73 | -0.171 |
| delta_Rv0954 | 0.049 | -0.149 |
| PonA1 | 0.629 | 1.154 |
| EccD1_KO | 1.394 | -0.28 |
| EspI_KO | 2.145 | 1.383 |
| PE35_KO | 1.852 | 2.856 |
| PPE68_KO | 2.755 | 2.003 |
| glycerol2 | 0.593 | 0.42 |
| lignocerate | 0.675 | -0.647 |
| oleate | 0.465 | 0.457 |
| phosphatidylcholine | 0.28 | 0.513 |
| acetate | 0.504 | -0.949 |
| glucAc | 0.811 | -1.283 |
| Rv0950ko | -1.182 | -1.643 |
| Rv1096ko | -0.609 | -1.644 |
| Rv3684ko | -0.534 | -2.05 |
| delta_otsA_trehalose | -0.139 | 0.322 |