Top 10 genes with highest correlation to Rv1491c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3050c/- | (cc=0.6229) | info on Rv3050c/- |
| Rv3818/- | (cc=0.6165) | info on Rv3818/- |
| Rv3794/embA | (cc=0.6065) | info on Rv3794/embA |
| Rv2584c/apt | (cc=0.5924) | info on Rv2584c/apt |
| Rv0642c/mmaA4 | (cc=0.5795) | info on Rv0642c/mmaA4 |
| Rv0050/ponA1 | (cc=0.5774) | info on Rv0050/ponA1 |
| Rv0502/- | (cc=0.5752) | info on Rv0502/- |
| Rv3218/- | (cc=0.5707) | info on Rv3218/- |
| Rv0645c/mmaA1 | (cc=0.55) | info on Rv0645c/mmaA1 |
| Rv0425c/ctpH | (cc=0.5445) | info on Rv0425c/ctpH |
Correlation of Rv1491c/- with Rv0050/ponA1
Normalized LFCs for Rv1491c/-:
(description and provenance of datasets)
| Rv1491c/- | Rv0050/ponA1 | |
| Fe_supp_jason_reseq | -0.737 | 0.508 |
| low_pH_jason_reseq | 0.482 | 0.192 |
| NO_jason_reseq | 0.58 | -0.16 |
| B6_jason_reseq | 0.139 | 0.777 |
| MHCII_jason_reseq | -0.984 | 0.058 |
| Isoniazid02 | -0.569 | -1.202 |
| Rifampicin4 | -0.972 | -1.156 |
| Ethambutol3 | -1.231 | -0.711 |
| Meropenem3 | -0.927 | -0.237 |
| Vancomycin16 | -1.685 | -4.51 |
| Rv2680_day32 | -0.412 | 0.058 |
| H37Rv_KO_MarP | -1.242 | -3.768 |
| hypoxia_3wks | 1.168 | -0.443 |
| hypoxia_6wks | 0.731 | -1.059 |
| glycerol | 0.028 | -0.146 |
| cholesterol | 0.235 | 0.398 |
| AJ | 0.064 | -0.644 |
| Bibs02 | -0.203 | -1.597 |
| Bibs02c | -0.402 | -0.399 |
| BL6 | 0.82 | 0.47 |
| BL6a | 0.161 | 0.319 |
| BXD01 | 0.408 | 0.322 |
| BXD010 | 0.751 | 0.316 |
| BXD011 | 1.582 | 0.966 |
| BXD03 | 0.219 | 0.604 |
| BXD04 | 0.627 | 0.634 |
| BXD05 | 0.4 | 0.877 |
| BXD06 | 0.452 | 0.33 |
| BXD07 | 0.696 | 0.452 |
| BXD08 | 0.248 | 1.558 |
| BXD09 | 0.719 | 0.69 |
| CAST | -0.365 | -0.439 |
| CCcont | 0.242 | 1.278 |
| DS01 | -0.534 | -0.084 |
| DS02 | -0.51 | -0.704 |
| DS04 | -0.389 | -0.453 |
| DS0c | 0.19 | 0.652 |
| GP01 | 0.166 | 0.396 |
| GP02 | 1.402 | 1.958 |
| GP0c | 0.4 | 1.151 |
| NOD | 0.031 | -0.428 |
| NZO | 0.418 | -0.553 |
| PWK | -0.901 | -0.831 |
| H37Rv_KO_CtpC | 0.367 | 0.213 |
| H37Rv_KO_CtpD | 0.742 | 0.566 |
| H37Rv_KO_Rv1272 | -0.06 | 0.048 |
| H37Rv_KO_SugABC | 0.218 | 1.16 |
| H37Rv_KO_MbtN | 1.359 | 0.484 |
| Trans05 | 0.787 | 0.249 |
| macrophage_unactivated | -0.376 | 0.65 |
| IL1 | 0.611 | 0.418 |
| Rapamycin | 0.516 | 1.188 |
| Tcell | 0.248 | 0.459 |
| GMCSF | 0.018 | 0.283 |
| IFNab | 0.49 | 0.72 |
| IFNg | 0.056 | 0.551 |
| IFNg_GMCSF1 | 0.324 | 0.748 |
| Rv1432_day32 | 0.488 | -1.068 |
| Rv1565c_day32 | 0.987 | 0.0 |
| secA2_input | -1.24 | -0.47 |
| delta_Rv3594 | -0.148 | 0.179 |
| delta_Rv3717 | 0.433 | -0.799 |
| delta_Rv3811 | 0.009 | 0.107 |
| delta_Rv0954 | -0.619 | -1.601 |
| PonA1 | -1.098 | -2.956 |
| EccD1_KO | -0.536 | -0.661 |
| EspI_KO | -0.99 | -0.761 |
| PE35_KO | -0.166 | -1.817 |
| PPE68_KO | -0.624 | -0.442 |
| glycerol2 | -0.479 | -1.582 |
| lignocerate | 0.167 | -1.61 |
| oleate | -1.259 | -1.733 |
| phosphatidylcholine | -0.268 | -2.001 |
| acetate | -0.218 | -0.291 |
| glucAc | 0.183 | -0.088 |
| Rv0950ko | -0.401 | -0.305 |
| Rv1096ko | -1.357 | -0.151 |
| Rv3684ko | -0.501 | 0.809 |
| delta_otsA_trehalose | -0.953 | 0.564 |