Top 10 genes with highest correlation to Rv1379/pyrR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0455c/- | (cc=0.6323) | info on Rv0455c/- |
| Rv3274c/fadE25 | (cc=0.6037) | info on Rv3274c/fadE25 |
| Rv2928/tesA | (cc=0.5819) | info on Rv2928/tesA |
| Rv2941/fadD28 | (cc=0.5386) | info on Rv2941/fadD28 |
| Rv2932/ppsB | (cc=0.5202) | info on Rv2932/ppsB |
| Rv2935/ppsE | (cc=0.518) | info on Rv2935/ppsE |
| Rv2931/ppsA | (cc=0.5014) | info on Rv2931/ppsA |
| Rv2933/ppsC | (cc=0.4973) | info on Rv2933/ppsC |
| Rv1286/cysN | (cc=0.494) | info on Rv1286/cysN |
| Rv2934/ppsD | (cc=0.4882) | info on Rv2934/ppsD |
Correlation of Rv1379/pyrR with Rv0455c/-
Normalized LFCs for Rv1379/pyrR:
(description and provenance of datasets)
| Rv1379/pyrR | Rv0455c/- | |
| Fe_supp_jason_reseq | 1.778 | 3.939 |
| low_pH_jason_reseq | -0.231 | 0.211 |
| NO_jason_reseq | 0.331 | -0.362 |
| B6_jason_reseq | 0.386 | -0.153 |
| MHCII_jason_reseq | -0.135 | -0.135 |
| Isoniazid02 | 0.0 | 0.167 |
| Rifampicin4 | 0.0 | -0.341 |
| Ethambutol3 | 0.0 | 0.27 |
| Meropenem3 | -0.315 | 0.0 |
| Vancomycin16 | 0.305 | -0.334 |
| Rv2680_day32 | -0.359 | 0.0 |
| H37Rv_KO_MarP | 1.637 | 4.219 |
| hypoxia_3wks | -0.55 | -1.511 |
| hypoxia_6wks | 1.311 | -0.791 |
| glycerol | 0.686 | 0.0 |
| cholesterol | 0.112 | 0.0 |
| AJ | -0.637 | 0.0 |
| Bibs02 | -0.502 | 0.0 |
| Bibs02c | -0.574 | 0.0 |
| BL6 | -0.343 | 0.0 |
| BL6a | -0.544 | 0.0 |
| BXD01 | 1.045 | 0.0 |
| BXD010 | -0.352 | 0.0 |
| BXD011 | -0.35 | 0.54 |
| BXD03 | -0.113 | 0.0 |
| BXD04 | 0.269 | 0.0 |
| BXD05 | -0.235 | 0.0 |
| BXD06 | 0.199 | 0.0 |
| BXD07 | 0.107 | 0.0 |
| BXD08 | 0.103 | 0.0 |
| BXD09 | -0.245 | 0.0 |
| CAST | -0.402 | 0.0 |
| CCcont | -0.41 | 2.716 |
| DS01 | -0.648 | 0.0 |
| DS02 | -0.597 | 0.0 |
| DS04 | -0.533 | 0.37 |
| DS0c | -0.596 | 0.0 |
| GP01 | -0.271 | 0.0 |
| GP02 | -0.145 | 0.0 |
| GP0c | -0.357 | 0.0 |
| NOD | -0.617 | 0.0 |
| NZO | -0.548 | 0.0 |
| PWK | -0.539 | 0.0 |
| H37Rv_KO_CtpC | -0.446 | 0.0 |
| H37Rv_KO_CtpD | -0.348 | 0.445 |
| H37Rv_KO_Rv1272 | -0.387 | 0.0 |
| H37Rv_KO_SugABC | -0.272 | 0.189 |
| H37Rv_KO_MbtN | -0.283 | 0.103 |
| Trans05 | -0.359 | 0.131 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.857 | 0.0 |
| GMCSF | 0.0 | 0.0 |
| IFNab | 0.0 | 0.0 |
| IFNg | 0.0 | 0.0 |
| IFNg_GMCSF1 | 0.434 | 0.0 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -0.528 | 1.273 |
| delta_Rv3594 | -1.597 | -1.597 |
| delta_Rv3717 | -1.691 | -0.143 |
| delta_Rv3811 | -2.561 | -1.423 |
| delta_Rv0954 | -1.737 | -2.762 |
| PonA1 | 0.19 | -3.142 |
| EccD1_KO | -1.013 | -0.595 |
| EspI_KO | -1.996 | -1.435 |
| PE35_KO | 0.601 | 1.085 |
| PPE68_KO | -0.566 | 0.0 |
| glycerol2 | -0.347 | 0.0 |
| lignocerate | -0.302 | 0.0 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | -0.347 | 0.0 |
| acetate | -0.13 | 0.0 |
| glucAc | -0.957 | 0.0 |
| Rv0950ko | -1.601 | -3.169 |
| Rv1096ko | -2.395 | -2.868 |
| Rv3684ko | -2.292 | -4.169 |
| delta_otsA_trehalose | 0.667 | 0.0 |