Top 10 genes with highest correlation to Rv1365c/rsfA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0885/- | (cc=0.5363) | info on Rv0885/- |
| Rv3525c/- | (cc=0.4917) | info on Rv3525c/- |
| Rv1507A/- | (cc=0.4834) | info on Rv1507A/- |
| Rv3116/moeB2 | (cc=0.4777) | info on Rv3116/moeB2 |
| Rv2061c/- | (cc=0.4642) | info on Rv2061c/- |
| Rv2922c/smc | (cc=0.4617) | info on Rv2922c/smc |
| Rv3361c/- | (cc=0.4594) | info on Rv3361c/- |
| Rv2196/qcrB | (cc=0.449) | info on Rv2196/qcrB |
| Rv1261c/- | (cc=0.4488) | info on Rv1261c/- |
| Rv2290/lppO | (cc=0.4464) | info on Rv2290/lppO |
Correlation of Rv1365c/rsfA with Rv3525c/-
Normalized LFCs for Rv1365c/rsfA:
(description and provenance of datasets)
| Rv1365c/rsfA | Rv3525c/- | |
| Fe_supp_jason_reseq | 0.415 | -0.846 |
| low_pH_jason_reseq | -0.022 | -0.386 |
| NO_jason_reseq | -1.57 | -0.69 |
| B6_jason_reseq | 0.269 | -0.584 |
| MHCII_jason_reseq | -0.315 | -0.066 |
| Isoniazid02 | -0.968 | -2.03 |
| Rifampicin4 | 0.623 | 0.56 |
| Ethambutol3 | -0.809 | -1.992 |
| Meropenem3 | -0.996 | -2.554 |
| Vancomycin16 | -0.422 | -0.915 |
| Rv2680_day32 | 0.526 | 1.002 |
| H37Rv_KO_MarP | 0.474 | 1.054 |
| hypoxia_3wks | 0.562 | 0.566 |
| hypoxia_6wks | 0.173 | 0.081 |
| glycerol | 0.492 | -0.012 |
| cholesterol | 0.559 | -0.776 |
| AJ | -0.583 | 0.066 |
| Bibs02 | 0.546 | 0.584 |
| Bibs02c | 2.099 | -0.309 |
| BL6 | 1.781 | -0.288 |
| BL6a | 1.759 | 0.247 |
| BXD01 | 0.977 | -0.788 |
| BXD010 | 1.214 | -0.314 |
| BXD011 | 1.783 | -0.197 |
| BXD03 | 0.909 | 0.133 |
| BXD04 | 1.551 | -0.605 |
| BXD05 | 0.982 | 0.323 |
| BXD06 | 1.132 | -0.356 |
| BXD07 | 1.649 | -0.169 |
| BXD08 | 1.453 | -0.752 |
| BXD09 | 1.469 | -0.208 |
| CAST | 0.522 | 0.287 |
| CCcont | 0.434 | -0.982 |
| DS01 | 0.944 | 0.08 |
| DS02 | 1.705 | -1.144 |
| DS04 | 2.689 | 0.561 |
| DS0c | 0.211 | -1.021 |
| GP01 | -1.344 | -1.589 |
| GP02 | 0.189 | -1.539 |
| GP0c | -1.286 | -1.783 |
| NOD | -0.291 | -0.093 |
| NZO | -0.449 | -0.669 |
| PWK | -0.651 | 0.213 |
| H37Rv_KO_CtpC | 0.672 | -0.284 |
| H37Rv_KO_CtpD | -0.351 | -1.105 |
| H37Rv_KO_Rv1272 | -0.183 | -0.589 |
| H37Rv_KO_SugABC | -1.06 | -1.767 |
| H37Rv_KO_MbtN | 0.164 | 0.654 |
| Trans05 | 0.138 | 0.029 |
| macrophage_unactivated | 1.367 | 0.603 |
| IL1 | 0.786 | -0.555 |
| Rapamycin | 0.859 | 0.344 |
| Tcell | 0.459 | 0.336 |
| GMCSF | 0.987 | 0.504 |
| IFNab | 1.061 | 0.732 |
| IFNg | 0.588 | 0.601 |
| IFNg_GMCSF1 | 1.832 | 0.091 |
| Rv1432_day32 | 0.591 | -0.103 |
| Rv1565c_day32 | -0.286 | -0.074 |
| secA2_input | 0.221 | -0.809 |
| delta_Rv3594 | 0.422 | 0.127 |
| delta_Rv3717 | 0.581 | -0.355 |
| delta_Rv3811 | 0.714 | 0.241 |
| delta_Rv0954 | 0.778 | -0.298 |
| PonA1 | 0.779 | -0.089 |
| EccD1_KO | 0.842 | 0.309 |
| EspI_KO | -0.297 | -1.569 |
| PE35_KO | 0.254 | -0.236 |
| PPE68_KO | 0.966 | -0.173 |
| glycerol2 | -1.079 | -0.804 |
| lignocerate | -1.143 | -1.136 |
| oleate | -0.034 | -0.405 |
| phosphatidylcholine | -0.57 | -0.606 |
| acetate | -1.44 | -1.298 |
| glucAc | -1.679 | -1.615 |
| Rv0950ko | -2.035 | 0.09 |
| Rv1096ko | -0.44 | 0.262 |
| Rv3684ko | -0.203 | -0.167 |
| delta_otsA_trehalose | 0.0 | -1.098 |