Top 10 genes with highest correlation to Rv1365c/rsfA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0885/- | (cc=0.5363) | info on Rv0885/- |
| Rv3525c/- | (cc=0.4917) | info on Rv3525c/- |
| Rv1507A/- | (cc=0.4834) | info on Rv1507A/- |
| Rv3116/moeB2 | (cc=0.4777) | info on Rv3116/moeB2 |
| Rv2061c/- | (cc=0.4642) | info on Rv2061c/- |
| Rv2922c/smc | (cc=0.4617) | info on Rv2922c/smc |
| Rv3361c/- | (cc=0.4594) | info on Rv3361c/- |
| Rv2196/qcrB | (cc=0.449) | info on Rv2196/qcrB |
| Rv1261c/- | (cc=0.4488) | info on Rv1261c/- |
| Rv2290/lppO | (cc=0.4464) | info on Rv2290/lppO |
Correlation of Rv1365c/rsfA with Rv2290/lppO
Normalized LFCs for Rv1365c/rsfA:
(description and provenance of datasets)
| Rv1365c/rsfA | Rv2290/lppO | |
| Fe_supp_jason_reseq | 0.415 | 0.537 |
| low_pH_jason_reseq | -0.022 | -0.182 |
| NO_jason_reseq | -1.57 | -0.06 |
| B6_jason_reseq | 0.269 | 0.398 |
| MHCII_jason_reseq | -0.315 | 0.099 |
| Isoniazid02 | -0.968 | -0.336 |
| Rifampicin4 | 0.623 | -1.064 |
| Ethambutol3 | -0.809 | -0.545 |
| Meropenem3 | -0.996 | -0.736 |
| Vancomycin16 | -0.422 | -0.438 |
| Rv2680_day32 | 0.526 | -0.222 |
| H37Rv_KO_MarP | 0.474 | 0.792 |
| hypoxia_3wks | 0.562 | 0.0 |
| hypoxia_6wks | 0.173 | 0.167 |
| glycerol | 0.492 | -0.012 |
| cholesterol | 0.559 | -0.244 |
| AJ | -0.583 | 0.027 |
| Bibs02 | 0.546 | 0.813 |
| Bibs02c | 2.099 | 0.129 |
| BL6 | 1.781 | 0.556 |
| BL6a | 1.759 | 0.288 |
| BXD01 | 0.977 | -0.892 |
| BXD010 | 1.214 | 0.448 |
| BXD011 | 1.783 | 0.75 |
| BXD03 | 0.909 | 0.257 |
| BXD04 | 1.551 | 0.135 |
| BXD05 | 0.982 | 0.658 |
| BXD06 | 1.132 | 0.075 |
| BXD07 | 1.649 | 0.07 |
| BXD08 | 1.453 | 0.008 |
| BXD09 | 1.469 | 0.358 |
| CAST | 0.522 | -0.312 |
| CCcont | 0.434 | -0.026 |
| DS01 | 0.944 | 0.014 |
| DS02 | 1.705 | -0.309 |
| DS04 | 2.689 | 0.011 |
| DS0c | 0.211 | -0.366 |
| GP01 | -1.344 | 0.26 |
| GP02 | 0.189 | 0.0 |
| GP0c | -1.286 | -0.57 |
| NOD | -0.291 | 0.592 |
| NZO | -0.449 | -0.107 |
| PWK | -0.651 | -0.117 |
| H37Rv_KO_CtpC | 0.672 | 0.228 |
| H37Rv_KO_CtpD | -0.351 | -0.867 |
| H37Rv_KO_Rv1272 | -0.183 | -0.421 |
| H37Rv_KO_SugABC | -1.06 | 0.271 |
| H37Rv_KO_MbtN | 0.164 | 0.253 |
| Trans05 | 0.138 | -0.331 |
| macrophage_unactivated | 1.367 | -0.123 |
| IL1 | 0.786 | -0.442 |
| Rapamycin | 0.859 | -0.264 |
| Tcell | 0.459 | -0.652 |
| GMCSF | 0.987 | 0.214 |
| IFNab | 1.061 | -0.408 |
| IFNg | 0.588 | 0.102 |
| IFNg_GMCSF1 | 1.832 | 1.59 |
| Rv1432_day32 | 0.591 | 0.332 |
| Rv1565c_day32 | -0.286 | 0.302 |
| secA2_input | 0.221 | -0.935 |
| delta_Rv3594 | 0.422 | 1.213 |
| delta_Rv3717 | 0.581 | 0.339 |
| delta_Rv3811 | 0.714 | 0.663 |
| delta_Rv0954 | 0.778 | -0.09 |
| PonA1 | 0.779 | 0.436 |
| EccD1_KO | 0.842 | 0.556 |
| EspI_KO | -0.297 | 0.311 |
| PE35_KO | 0.254 | 1.0 |
| PPE68_KO | 0.966 | 0.621 |
| glycerol2 | -1.079 | -1.833 |
| lignocerate | -1.143 | -2.314 |
| oleate | -0.034 | -1.733 |
| phosphatidylcholine | -0.57 | -2.438 |
| acetate | -1.44 | -3.262 |
| glucAc | -1.679 | -1.611 |
| Rv0950ko | -2.035 | 0.537 |
| Rv1096ko | -0.44 | -0.588 |
| Rv3684ko | -0.203 | -0.743 |
| delta_otsA_trehalose | 0.0 | -0.472 |