Top 10 genes with highest correlation to Rv1365c/rsfA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0885/- | (cc=0.5363) | info on Rv0885/- |
| Rv3525c/- | (cc=0.4917) | info on Rv3525c/- |
| Rv1507A/- | (cc=0.4834) | info on Rv1507A/- |
| Rv3116/moeB2 | (cc=0.4777) | info on Rv3116/moeB2 |
| Rv2061c/- | (cc=0.4642) | info on Rv2061c/- |
| Rv2922c/smc | (cc=0.4617) | info on Rv2922c/smc |
| Rv3361c/- | (cc=0.4594) | info on Rv3361c/- |
| Rv2196/qcrB | (cc=0.449) | info on Rv2196/qcrB |
| Rv1261c/- | (cc=0.4488) | info on Rv1261c/- |
| Rv2290/lppO | (cc=0.4464) | info on Rv2290/lppO |
Correlation of Rv1365c/rsfA with Rv2061c/-
Normalized LFCs for Rv1365c/rsfA:
(description and provenance of datasets)
| Rv1365c/rsfA | Rv2061c/- | |
| Fe_supp_jason_reseq | 0.415 | -0.24 |
| low_pH_jason_reseq | -0.022 | 1.166 |
| NO_jason_reseq | -1.57 | 0.021 |
| B6_jason_reseq | 0.269 | 0.145 |
| MHCII_jason_reseq | -0.315 | 0.051 |
| Isoniazid02 | -0.968 | -2.865 |
| Rifampicin4 | 0.623 | 0.463 |
| Ethambutol3 | -0.809 | -2.36 |
| Meropenem3 | -0.996 | -1.973 |
| Vancomycin16 | -0.422 | -0.87 |
| Rv2680_day32 | 0.526 | 0.067 |
| H37Rv_KO_MarP | 0.474 | 0.838 |
| hypoxia_3wks | 0.562 | -0.088 |
| hypoxia_6wks | 0.173 | 0.069 |
| glycerol | 0.492 | -0.685 |
| cholesterol | 0.559 | -0.847 |
| AJ | -0.583 | -0.087 |
| Bibs02 | 0.546 | 1.325 |
| Bibs02c | 2.099 | 0.887 |
| BL6 | 1.781 | -0.542 |
| BL6a | 1.759 | 0.97 |
| BXD01 | 0.977 | -0.037 |
| BXD010 | 1.214 | 0.502 |
| BXD011 | 1.783 | 0.229 |
| BXD03 | 0.909 | -0.423 |
| BXD04 | 1.551 | 0.935 |
| BXD05 | 0.982 | 0.21 |
| BXD06 | 1.132 | 0.759 |
| BXD07 | 1.649 | 0.147 |
| BXD08 | 1.453 | 0.452 |
| BXD09 | 1.469 | 0.37 |
| CAST | 0.522 | -0.721 |
| CCcont | 0.434 | -0.626 |
| DS01 | 0.944 | 1.073 |
| DS02 | 1.705 | 0.176 |
| DS04 | 2.689 | 0.333 |
| DS0c | 0.211 | -0.652 |
| GP01 | -1.344 | -1.547 |
| GP02 | 0.189 | -1.873 |
| GP0c | -1.286 | -2.341 |
| NOD | -0.291 | -1.103 |
| NZO | -0.449 | -0.075 |
| PWK | -0.651 | 0.627 |
| H37Rv_KO_CtpC | 0.672 | 0.758 |
| H37Rv_KO_CtpD | -0.351 | -1.788 |
| H37Rv_KO_Rv1272 | -0.183 | 0.833 |
| H37Rv_KO_SugABC | -1.06 | 0.009 |
| H37Rv_KO_MbtN | 0.164 | 1.646 |
| Trans05 | 0.138 | 0.314 |
| macrophage_unactivated | 1.367 | 0.455 |
| IL1 | 0.786 | 1.711 |
| Rapamycin | 0.859 | 0.408 |
| Tcell | 0.459 | 0.736 |
| GMCSF | 0.987 | 1.201 |
| IFNab | 1.061 | 0.402 |
| IFNg | 0.588 | 0.861 |
| IFNg_GMCSF1 | 1.832 | 1.562 |
| Rv1432_day32 | 0.591 | -0.597 |
| Rv1565c_day32 | -0.286 | -0.494 |
| secA2_input | 0.221 | -1.061 |
| delta_Rv3594 | 0.422 | -0.722 |
| delta_Rv3717 | 0.581 | -1.058 |
| delta_Rv3811 | 0.714 | -1.419 |
| delta_Rv0954 | 0.778 | -1.026 |
| PonA1 | 0.779 | -0.372 |
| EccD1_KO | 0.842 | -0.891 |
| EspI_KO | -0.297 | -0.499 |
| PE35_KO | 0.254 | -1.234 |
| PPE68_KO | 0.966 | -1.789 |
| glycerol2 | -1.079 | -0.056 |
| lignocerate | -1.143 | -0.761 |
| oleate | -0.034 | 0.926 |
| phosphatidylcholine | -0.57 | 0.459 |
| acetate | -1.44 | 0.281 |
| glucAc | -1.679 | -2.954 |
| Rv0950ko | -2.035 | -1.306 |
| Rv1096ko | -0.44 | -0.464 |
| Rv3684ko | -0.203 | 0.481 |
| delta_otsA_trehalose | 0.0 | -0.053 |