Top 10 genes with highest correlation to Rv1358/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3098c/- | (cc=0.5094) | info on Rv3098c/- |
| Rv2320c/rocE | (cc=0.4733) | info on Rv2320c/rocE |
| Rv0892/- | (cc=0.4726) | info on Rv0892/- |
| Rv0908/ctpE | (cc=0.4674) | info on Rv0908/ctpE |
| Rv1984c/cfp21 | (cc=0.4633) | info on Rv1984c/cfp21 |
| Rv3238c/- | (cc=0.4358) | info on Rv3238c/- |
| Rv0852/fadD16 | (cc=0.4341) | info on Rv0852/fadD16 |
| Rv3022A/PE29 | (cc=0.4273) | info on Rv3022A/PE29 |
| Rv0845/- | (cc=0.4183) | info on Rv0845/- |
| Rv1400c/lipI | (cc=0.4148) | info on Rv1400c/lipI |
Correlation of Rv1358/- with Rv1984c/cfp21
Normalized LFCs for Rv1358/-:
(description and provenance of datasets)
| Rv1358/- | Rv1984c/cfp21 | |
| Fe_supp_jason_reseq | 0.218 | 0.775 |
| low_pH_jason_reseq | 0.149 | -0.08 |
| NO_jason_reseq | -0.139 | -0.307 |
| B6_jason_reseq | 0.421 | -0.195 |
| MHCII_jason_reseq | -0.33 | -0.398 |
| Isoniazid02 | -0.294 | 0.14 |
| Rifampicin4 | -0.06 | -0.03 |
| Ethambutol3 | 0.275 | 0.339 |
| Meropenem3 | 0.562 | 0.258 |
| Vancomycin16 | -0.029 | -0.623 |
| Rv2680_day32 | -0.599 | -0.478 |
| H37Rv_KO_MarP | -0.021 | -0.358 |
| hypoxia_3wks | -0.048 | -0.215 |
| hypoxia_6wks | 0.1 | -0.695 |
| glycerol | -0.266 | -2.041 |
| cholesterol | -0.065 | -0.796 |
| AJ | 0.061 | -0.134 |
| Bibs02 | 0.048 | -0.244 |
| Bibs02c | 0.161 | 0.239 |
| BL6 | -0.399 | -0.179 |
| BL6a | 0.217 | 0.532 |
| BXD01 | -0.198 | 0.26 |
| BXD010 | -0.348 | 0.816 |
| BXD011 | 0.139 | 0.199 |
| BXD03 | -0.399 | 0.416 |
| BXD04 | 0.105 | 0.92 |
| BXD05 | 0.126 | 0.235 |
| BXD06 | 0.035 | 0.017 |
| BXD07 | -0.012 | 0.321 |
| BXD08 | -0.036 | 0.266 |
| BXD09 | -0.076 | 0.138 |
| CAST | 0.195 | -0.307 |
| CCcont | -0.138 | -0.551 |
| DS01 | -0.086 | -0.373 |
| DS02 | 0.038 | -0.377 |
| DS04 | 0.034 | -0.059 |
| DS0c | 0.113 | -0.226 |
| GP01 | -0.092 | 0.853 |
| GP02 | -0.255 | 0.353 |
| GP0c | -0.414 | 0.409 |
| NOD | 0.548 | -0.14 |
| NZO | -0.053 | -0.483 |
| PWK | 0.408 | -0.104 |
| H37Rv_KO_CtpC | 0.278 | 0.108 |
| H37Rv_KO_CtpD | 0.596 | 1.094 |
| H37Rv_KO_Rv1272 | 0.606 | 1.786 |
| H37Rv_KO_SugABC | 0.659 | 0.713 |
| H37Rv_KO_MbtN | 0.662 | 0.425 |
| Trans05 | 0.707 | 0.807 |
| macrophage_unactivated | 0.404 | 0.464 |
| IL1 | -0.258 | -0.053 |
| Rapamycin | -0.19 | 0.092 |
| Tcell | 0.156 | -0.137 |
| GMCSF | -0.264 | 0.079 |
| IFNab | 0.351 | -0.073 |
| IFNg | 0.371 | 0.436 |
| IFNg_GMCSF1 | -0.075 | 0.289 |
| Rv1432_day32 | 0.153 | 0.445 |
| Rv1565c_day32 | 0.758 | 0.567 |
| secA2_input | -0.77 | -0.78 |
| delta_Rv3594 | 0.13 | -0.147 |
| delta_Rv3717 | -0.385 | -0.551 |
| delta_Rv3811 | -0.455 | -0.604 |
| delta_Rv0954 | 0.298 | -0.466 |
| PonA1 | -0.409 | -0.905 |
| EccD1_KO | 0.224 | -0.474 |
| EspI_KO | 0.234 | 0.14 |
| PE35_KO | 0.677 | -0.012 |
| PPE68_KO | 0.819 | 0.074 |
| glycerol2 | -0.104 | -0.203 |
| lignocerate | -0.242 | -0.379 |
| oleate | 0.058 | 0.203 |
| phosphatidylcholine | -0.104 | 0.303 |
| acetate | -0.234 | -0.517 |
| glucAc | -0.458 | -1.067 |
| Rv0950ko | 0.528 | -0.286 |
| Rv1096ko | 0.371 | -1.463 |
| Rv3684ko | 0.367 | -0.088 |
| delta_otsA_trehalose | -1.22 | -1.63 |