Top 10 genes with highest correlation to Rv1358/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3098c/- | (cc=0.5094) | info on Rv3098c/- |
| Rv2320c/rocE | (cc=0.4733) | info on Rv2320c/rocE |
| Rv0892/- | (cc=0.4726) | info on Rv0892/- |
| Rv0908/ctpE | (cc=0.4674) | info on Rv0908/ctpE |
| Rv1984c/cfp21 | (cc=0.4633) | info on Rv1984c/cfp21 |
| Rv3238c/- | (cc=0.4358) | info on Rv3238c/- |
| Rv0852/fadD16 | (cc=0.4341) | info on Rv0852/fadD16 |
| Rv3022A/PE29 | (cc=0.4273) | info on Rv3022A/PE29 |
| Rv0845/- | (cc=0.4183) | info on Rv0845/- |
| Rv1400c/lipI | (cc=0.4148) | info on Rv1400c/lipI |
Correlation of Rv1358/- with Rv1400c/lipI
Normalized LFCs for Rv1358/-:
(description and provenance of datasets)
| Rv1358/- | Rv1400c/lipI | |
| Fe_supp_jason_reseq | 0.218 | 0.276 |
| low_pH_jason_reseq | 0.149 | 0.427 |
| NO_jason_reseq | -0.139 | 0.772 |
| B6_jason_reseq | 0.421 | 0.326 |
| MHCII_jason_reseq | -0.33 | -0.932 |
| Isoniazid02 | -0.294 | 0.163 |
| Rifampicin4 | -0.06 | 0.588 |
| Ethambutol3 | 0.275 | 0.18 |
| Meropenem3 | 0.562 | 0.892 |
| Vancomycin16 | -0.029 | 0.393 |
| Rv2680_day32 | -0.599 | -1.139 |
| H37Rv_KO_MarP | -0.021 | -1.204 |
| hypoxia_3wks | -0.048 | -0.132 |
| hypoxia_6wks | 0.1 | 0.779 |
| glycerol | -0.266 | -0.363 |
| cholesterol | -0.065 | -0.898 |
| AJ | 0.061 | -1.114 |
| Bibs02 | 0.048 | -0.212 |
| Bibs02c | 0.161 | 0.218 |
| BL6 | -0.399 | 0.53 |
| BL6a | 0.217 | 0.35 |
| BXD01 | -0.198 | 0.73 |
| BXD010 | -0.348 | -0.072 |
| BXD011 | 0.139 | 0.869 |
| BXD03 | -0.399 | -0.076 |
| BXD04 | 0.105 | -0.034 |
| BXD05 | 0.126 | 0.0 |
| BXD06 | 0.035 | 0.236 |
| BXD07 | -0.012 | 0.144 |
| BXD08 | -0.036 | 0.106 |
| BXD09 | -0.076 | -0.208 |
| CAST | 0.195 | -0.34 |
| CCcont | -0.138 | -0.173 |
| DS01 | -0.086 | -0.065 |
| DS02 | 0.038 | -0.391 |
| DS04 | 0.034 | 0.557 |
| DS0c | 0.113 | -0.123 |
| GP01 | -0.092 | 0.127 |
| GP02 | -0.255 | -0.023 |
| GP0c | -0.414 | -0.112 |
| NOD | 0.548 | -0.332 |
| NZO | -0.053 | -0.295 |
| PWK | 0.408 | 0.521 |
| H37Rv_KO_CtpC | 0.278 | -1.365 |
| H37Rv_KO_CtpD | 0.596 | -0.405 |
| H37Rv_KO_Rv1272 | 0.606 | 2.418 |
| H37Rv_KO_SugABC | 0.659 | 1.65 |
| H37Rv_KO_MbtN | 0.662 | -1.001 |
| Trans05 | 0.707 | 2.361 |
| macrophage_unactivated | 0.404 | 0.751 |
| IL1 | -0.258 | -0.11 |
| Rapamycin | -0.19 | 0.221 |
| Tcell | 0.156 | 0.978 |
| GMCSF | -0.264 | 0.372 |
| IFNab | 0.351 | 1.339 |
| IFNg | 0.371 | 1.184 |
| IFNg_GMCSF1 | -0.075 | 0.336 |
| Rv1432_day32 | 0.153 | 0.0 |
| Rv1565c_day32 | 0.758 | -0.137 |
| secA2_input | -0.77 | 0.0 |
| delta_Rv3594 | 0.13 | 0.125 |
| delta_Rv3717 | -0.385 | -0.148 |
| delta_Rv3811 | -0.455 | -0.269 |
| delta_Rv0954 | 0.298 | 0.394 |
| PonA1 | -0.409 | 0.063 |
| EccD1_KO | 0.224 | 0.888 |
| EspI_KO | 0.234 | 0.12 |
| PE35_KO | 0.677 | 1.706 |
| PPE68_KO | 0.819 | 1.395 |
| glycerol2 | -0.104 | -0.835 |
| lignocerate | -0.242 | -0.532 |
| oleate | 0.058 | -0.096 |
| phosphatidylcholine | -0.104 | -0.374 |
| acetate | -0.234 | -0.535 |
| glucAc | -0.458 | -0.724 |
| Rv0950ko | 0.528 | -0.181 |
| Rv1096ko | 0.371 | 0.0 |
| Rv3684ko | 0.367 | 0.282 |
| delta_otsA_trehalose | -1.22 | 0.139 |