Top 10 genes with highest correlation to Rv1358/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3098c/- | (cc=0.5094) | info on Rv3098c/- |
| Rv2320c/rocE | (cc=0.4733) | info on Rv2320c/rocE |
| Rv0892/- | (cc=0.4726) | info on Rv0892/- |
| Rv0908/ctpE | (cc=0.4674) | info on Rv0908/ctpE |
| Rv1984c/cfp21 | (cc=0.4633) | info on Rv1984c/cfp21 |
| Rv3238c/- | (cc=0.4358) | info on Rv3238c/- |
| Rv0852/fadD16 | (cc=0.4341) | info on Rv0852/fadD16 |
| Rv3022A/PE29 | (cc=0.4273) | info on Rv3022A/PE29 |
| Rv0845/- | (cc=0.4183) | info on Rv0845/- |
| Rv1400c/lipI | (cc=0.4148) | info on Rv1400c/lipI |
Correlation of Rv1358/- with Rv0908/ctpE
Normalized LFCs for Rv1358/-:
(description and provenance of datasets)
| Rv1358/- | Rv0908/ctpE | |
| Fe_supp_jason_reseq | 0.218 | -0.084 |
| low_pH_jason_reseq | 0.149 | -0.587 |
| NO_jason_reseq | -0.139 | 0.034 |
| B6_jason_reseq | 0.421 | 0.361 |
| MHCII_jason_reseq | -0.33 | -1.273 |
| Isoniazid02 | -0.294 | 0.164 |
| Rifampicin4 | -0.06 | -0.179 |
| Ethambutol3 | 0.275 | -0.297 |
| Meropenem3 | 0.562 | 1.093 |
| Vancomycin16 | -0.029 | -0.029 |
| Rv2680_day32 | -0.599 | -0.174 |
| H37Rv_KO_MarP | -0.021 | 0.785 |
| hypoxia_3wks | -0.048 | -1.571 |
| hypoxia_6wks | 0.1 | -2.224 |
| glycerol | -0.266 | -0.803 |
| cholesterol | -0.065 | 0.095 |
| AJ | 0.061 | -0.2 |
| Bibs02 | 0.048 | -0.041 |
| Bibs02c | 0.161 | -0.064 |
| BL6 | -0.399 | 0.037 |
| BL6a | 0.217 | -0.522 |
| BXD01 | -0.198 | -0.654 |
| BXD010 | -0.348 | -0.326 |
| BXD011 | 0.139 | 0.179 |
| BXD03 | -0.399 | 0.19 |
| BXD04 | 0.105 | 1.114 |
| BXD05 | 0.126 | 0.198 |
| BXD06 | 0.035 | -0.083 |
| BXD07 | -0.012 | -0.392 |
| BXD08 | -0.036 | 0.222 |
| BXD09 | -0.076 | -0.528 |
| CAST | 0.195 | 0.369 |
| CCcont | -0.138 | -0.768 |
| DS01 | -0.086 | -0.128 |
| DS02 | 0.038 | 0.033 |
| DS04 | 0.034 | 0.044 |
| DS0c | 0.113 | -0.17 |
| GP01 | -0.092 | -0.583 |
| GP02 | -0.255 | -0.304 |
| GP0c | -0.414 | -0.517 |
| NOD | 0.548 | 1.451 |
| NZO | -0.053 | -0.47 |
| PWK | 0.408 | 0.183 |
| H37Rv_KO_CtpC | 0.278 | 0.477 |
| H37Rv_KO_CtpD | 0.596 | -0.748 |
| H37Rv_KO_Rv1272 | 0.606 | 0.923 |
| H37Rv_KO_SugABC | 0.659 | 0.484 |
| H37Rv_KO_MbtN | 0.662 | -0.007 |
| Trans05 | 0.707 | 0.497 |
| macrophage_unactivated | 0.404 | -0.603 |
| IL1 | -0.258 | 0.0 |
| Rapamycin | -0.19 | -0.368 |
| Tcell | 0.156 | -0.085 |
| GMCSF | -0.264 | 0.475 |
| IFNab | 0.351 | -0.71 |
| IFNg | 0.371 | -0.588 |
| IFNg_GMCSF1 | -0.075 | -0.553 |
| Rv1432_day32 | 0.153 | 0.055 |
| Rv1565c_day32 | 0.758 | 1.159 |
| secA2_input | -0.77 | -0.734 |
| delta_Rv3594 | 0.13 | -0.418 |
| delta_Rv3717 | -0.385 | -0.766 |
| delta_Rv3811 | -0.455 | -1.044 |
| delta_Rv0954 | 0.298 | 0.03 |
| PonA1 | -0.409 | 0.144 |
| EccD1_KO | 0.224 | 0.835 |
| EspI_KO | 0.234 | 0.684 |
| PE35_KO | 0.677 | 0.907 |
| PPE68_KO | 0.819 | 1.085 |
| glycerol2 | -0.104 | -0.099 |
| lignocerate | -0.242 | -0.313 |
| oleate | 0.058 | -0.588 |
| phosphatidylcholine | -0.104 | 0.076 |
| acetate | -0.234 | 0.0 |
| glucAc | -0.458 | -0.014 |
| Rv0950ko | 0.528 | 0.98 |
| Rv1096ko | 0.371 | 1.158 |
| Rv3684ko | 0.367 | 0.776 |
| delta_otsA_trehalose | -1.22 | -0.383 |