Top 10 genes with highest correlation to Rv1358/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3098c/- | (cc=0.5094) | info on Rv3098c/- |
| Rv2320c/rocE | (cc=0.4733) | info on Rv2320c/rocE |
| Rv0892/- | (cc=0.4726) | info on Rv0892/- |
| Rv0908/ctpE | (cc=0.4674) | info on Rv0908/ctpE |
| Rv1984c/cfp21 | (cc=0.4633) | info on Rv1984c/cfp21 |
| Rv3238c/- | (cc=0.4358) | info on Rv3238c/- |
| Rv0852/fadD16 | (cc=0.4341) | info on Rv0852/fadD16 |
| Rv3022A/PE29 | (cc=0.4273) | info on Rv3022A/PE29 |
| Rv0845/- | (cc=0.4183) | info on Rv0845/- |
| Rv1400c/lipI | (cc=0.4148) | info on Rv1400c/lipI |
Correlation of Rv1358/- with Rv3098c/-
Normalized LFCs for Rv1358/-:
(description and provenance of datasets)
| Rv1358/- | Rv3098c/- | |
| Fe_supp_jason_reseq | 0.218 | 0.096 |
| low_pH_jason_reseq | 0.149 | 0.069 |
| NO_jason_reseq | -0.139 | -1.591 |
| B6_jason_reseq | 0.421 | -0.743 |
| MHCII_jason_reseq | -0.33 | -1.732 |
| Isoniazid02 | -0.294 | -1.678 |
| Rifampicin4 | -0.06 | -0.046 |
| Ethambutol3 | 0.275 | -0.924 |
| Meropenem3 | 0.562 | 2.072 |
| Vancomycin16 | -0.029 | -0.69 |
| Rv2680_day32 | -0.599 | -0.816 |
| H37Rv_KO_MarP | -0.021 | 0.066 |
| hypoxia_3wks | -0.048 | 0.463 |
| hypoxia_6wks | 0.1 | 0.574 |
| glycerol | -0.266 | 0.821 |
| cholesterol | -0.065 | 0.0 |
| AJ | 0.061 | 0.545 |
| Bibs02 | 0.048 | 0.807 |
| Bibs02c | 0.161 | 1.034 |
| BL6 | -0.399 | 0.159 |
| BL6a | 0.217 | 0.794 |
| BXD01 | -0.198 | 0.192 |
| BXD010 | -0.348 | -0.739 |
| BXD011 | 0.139 | 0.58 |
| BXD03 | -0.399 | 0.079 |
| BXD04 | 0.105 | 0.116 |
| BXD05 | 0.126 | 0.561 |
| BXD06 | 0.035 | 0.143 |
| BXD07 | -0.012 | -0.365 |
| BXD08 | -0.036 | 0.533 |
| BXD09 | -0.076 | 0.372 |
| CAST | 0.195 | -0.455 |
| CCcont | -0.138 | -0.75 |
| DS01 | -0.086 | -0.222 |
| DS02 | 0.038 | 0.484 |
| DS04 | 0.034 | -0.152 |
| DS0c | 0.113 | -1.339 |
| GP01 | -0.092 | 0.406 |
| GP02 | -0.255 | -0.872 |
| GP0c | -0.414 | -0.257 |
| NOD | 0.548 | 1.253 |
| NZO | -0.053 | 0.074 |
| PWK | 0.408 | 0.705 |
| H37Rv_KO_CtpC | 0.278 | 0.42 |
| H37Rv_KO_CtpD | 0.596 | 0.667 |
| H37Rv_KO_Rv1272 | 0.606 | -0.156 |
| H37Rv_KO_SugABC | 0.659 | 0.461 |
| H37Rv_KO_MbtN | 0.662 | 0.308 |
| Trans05 | 0.707 | 2.1 |
| macrophage_unactivated | 0.404 | -0.808 |
| IL1 | -0.258 | -0.169 |
| Rapamycin | -0.19 | -1.307 |
| Tcell | 0.156 | -0.3 |
| GMCSF | -0.264 | 0.145 |
| IFNab | 0.351 | -1.333 |
| IFNg | 0.371 | -0.906 |
| IFNg_GMCSF1 | -0.075 | -0.179 |
| Rv1432_day32 | 0.153 | 0.0 |
| Rv1565c_day32 | 0.758 | 0.881 |
| secA2_input | -0.77 | -0.49 |
| delta_Rv3594 | 0.13 | -0.844 |
| delta_Rv3717 | -0.385 | -0.808 |
| delta_Rv3811 | -0.455 | -1.151 |
| delta_Rv0954 | 0.298 | -0.368 |
| PonA1 | -0.409 | -0.663 |
| EccD1_KO | 0.224 | 0.934 |
| EspI_KO | 0.234 | 0.559 |
| PE35_KO | 0.677 | 0.481 |
| PPE68_KO | 0.819 | 0.816 |
| glycerol2 | -0.104 | 0.165 |
| lignocerate | -0.242 | -0.447 |
| oleate | 0.058 | 0.802 |
| phosphatidylcholine | -0.104 | -0.112 |
| acetate | -0.234 | -0.944 |
| glucAc | -0.458 | -0.75 |
| Rv0950ko | 0.528 | 0.754 |
| Rv1096ko | 0.371 | -0.124 |
| Rv3684ko | 0.367 | -0.033 |
| delta_otsA_trehalose | -1.22 | -1.226 |