Top 10 genes with highest correlation to Rv1336/cysM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1334/mec | (cc=0.8246) | info on Rv1334/mec |
| Rv1337/- | (cc=0.8102) | info on Rv1337/- |
| Rv1335/cysO | (cc=0.7759) | info on Rv1335/cysO |
| Rv1333/- | (cc=0.7626) | info on Rv1333/- |
| Rv3842c/glpQ1 | (cc=0.7007) | info on Rv3842c/glpQ1 |
| Rv0047c/- | (cc=0.6919) | info on Rv0047c/- |
| Rv0153c/ptbB | (cc=0.6712) | info on Rv0153c/ptbB |
| Rv0644c/mmaA2 | (cc=0.6637) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6501) | info on Rv0645c/mmaA1 |
| Rv1640c/lysX | (cc=0.6454) | info on Rv1640c/lysX |
Correlation of Rv1336/cysM with Rv1640c/lysX
Normalized LFCs for Rv1336/cysM:
(description and provenance of datasets)
| Rv1336/cysM | Rv1640c/lysX | |
| Fe_supp_jason_reseq | 0.199 | 0.77 |
| low_pH_jason_reseq | 0.831 | -1.434 |
| NO_jason_reseq | 1.113 | -0.058 |
| B6_jason_reseq | 0.705 | 1.258 |
| MHCII_jason_reseq | -0.079 | 0.159 |
| Isoniazid02 | 1.385 | -1.263 |
| Rifampicin4 | 0.076 | -3.187 |
| Ethambutol3 | -0.593 | -2.24 |
| Meropenem3 | 0.628 | 0.879 |
| Vancomycin16 | 0.666 | -2.303 |
| Rv2680_day32 | 0.675 | 1.078 |
| H37Rv_KO_MarP | -0.425 | -2.764 |
| hypoxia_3wks | 2.213 | 4.366 |
| hypoxia_6wks | 4.042 | 3.111 |
| glycerol | -0.967 | -0.42 |
| cholesterol | 0.048 | -0.564 |
| AJ | -1.56 | -1.642 |
| Bibs02 | -1.444 | -0.498 |
| Bibs02c | -1.203 | 0.899 |
| BL6 | 1.43 | 0.906 |
| BL6a | 1.05 | 1.69 |
| BXD01 | 2.221 | 2.01 |
| BXD010 | 1.974 | 1.596 |
| BXD011 | 3.102 | 1.594 |
| BXD03 | 1.156 | 0.98 |
| BXD04 | 1.994 | 1.294 |
| BXD05 | 1.724 | 1.265 |
| BXD06 | 2.328 | 1.635 |
| BXD07 | 2.6 | 1.674 |
| BXD08 | 2.71 | 2.286 |
| BXD09 | 1.771 | 2.565 |
| CAST | -0.594 | -2.147 |
| CCcont | 0.248 | 1.12 |
| DS01 | -1.632 | 0.195 |
| DS02 | -1.306 | 0.247 |
| DS04 | -0.136 | 0.854 |
| DS0c | -1.194 | -0.115 |
| GP01 | 1.134 | 1.087 |
| GP02 | 0.251 | 1.427 |
| GP0c | 1.595 | 1.205 |
| NOD | -1.128 | -1.515 |
| NZO | 0.23 | -0.932 |
| PWK | -0.469 | -1.829 |
| H37Rv_KO_CtpC | -0.578 | 1.204 |
| H37Rv_KO_CtpD | 0.006 | 0.694 |
| H37Rv_KO_Rv1272 | 1.298 | 1.286 |
| H37Rv_KO_SugABC | 0.836 | 1.294 |
| H37Rv_KO_MbtN | 2.209 | 2.599 |
| Trans05 | 1.733 | 1.806 |
| macrophage_unactivated | -2.061 | -2.358 |
| IL1 | -0.163 | -1.465 |
| Rapamycin | -0.915 | -1.645 |
| Tcell | 0.29 | -1.147 |
| GMCSF | -1.428 | -1.719 |
| IFNab | 0.115 | -0.293 |
| IFNg | -0.901 | -0.919 |
| IFNg_GMCSF1 | -1.024 | -2.077 |
| Rv1432_day32 | 0.846 | 2.379 |
| Rv1565c_day32 | -1.439 | -2.854 |
| secA2_input | 0.227 | 0.864 |
| delta_Rv3594 | 0.858 | 1.628 |
| delta_Rv3717 | 2.129 | 3.157 |
| delta_Rv3811 | 1.103 | 1.46 |
| delta_Rv0954 | -0.291 | -0.261 |
| PonA1 | -0.995 | -0.856 |
| EccD1_KO | 0.22 | -1.332 |
| EspI_KO | 0.088 | -1.557 |
| PE35_KO | -0.715 | -2.15 |
| PPE68_KO | 0.016 | -1.296 |
| glycerol2 | -0.206 | -0.744 |
| lignocerate | -2.133 | -1.006 |
| oleate | 2.606 | -2.925 |
| phosphatidylcholine | -1.732 | -1.678 |
| acetate | -0.073 | 0.271 |
| glucAc | -0.255 | 0.236 |
| Rv0950ko | -0.633 | -1.128 |
| Rv1096ko | -0.305 | 0.093 |
| Rv3684ko | 0.308 | 1.055 |
| delta_otsA_trehalose | -0.053 | -0.468 |