Top 10 genes with highest correlation to Rv1336/cysM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1334/mec | (cc=0.8246) | info on Rv1334/mec |
| Rv1337/- | (cc=0.8102) | info on Rv1337/- |
| Rv1335/cysO | (cc=0.7759) | info on Rv1335/cysO |
| Rv1333/- | (cc=0.7626) | info on Rv1333/- |
| Rv3842c/glpQ1 | (cc=0.7007) | info on Rv3842c/glpQ1 |
| Rv0047c/- | (cc=0.6919) | info on Rv0047c/- |
| Rv0153c/ptbB | (cc=0.6712) | info on Rv0153c/ptbB |
| Rv0644c/mmaA2 | (cc=0.6637) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6501) | info on Rv0645c/mmaA1 |
| Rv1640c/lysX | (cc=0.6454) | info on Rv1640c/lysX |
Correlation of Rv1336/cysM with Rv0153c/ptbB
Normalized LFCs for Rv1336/cysM:
(description and provenance of datasets)
| Rv1336/cysM | Rv0153c/ptbB | |
| Fe_supp_jason_reseq | 0.199 | -0.074 |
| low_pH_jason_reseq | 0.831 | 3.853 |
| NO_jason_reseq | 1.113 | -1.131 |
| B6_jason_reseq | 0.705 | -1.162 |
| MHCII_jason_reseq | -0.079 | -0.847 |
| Isoniazid02 | 1.385 | 4.679 |
| Rifampicin4 | 0.076 | 0.07 |
| Ethambutol3 | -0.593 | -0.238 |
| Meropenem3 | 0.628 | 0.315 |
| Vancomycin16 | 0.666 | 0.268 |
| Rv2680_day32 | 0.675 | 2.079 |
| H37Rv_KO_MarP | -0.425 | -0.137 |
| hypoxia_3wks | 2.213 | 1.204 |
| hypoxia_6wks | 4.042 | 1.153 |
| glycerol | -0.967 | 0.241 |
| cholesterol | 0.048 | -0.917 |
| AJ | -1.56 | -0.983 |
| Bibs02 | -1.444 | -1.268 |
| Bibs02c | -1.203 | -0.696 |
| BL6 | 1.43 | 2.566 |
| BL6a | 1.05 | 1.058 |
| BXD01 | 2.221 | 2.729 |
| BXD010 | 1.974 | 1.705 |
| BXD011 | 3.102 | 1.306 |
| BXD03 | 1.156 | 0.0 |
| BXD04 | 1.994 | 2.428 |
| BXD05 | 1.724 | 0.932 |
| BXD06 | 2.328 | 1.653 |
| BXD07 | 2.6 | 1.781 |
| BXD08 | 2.71 | 3.325 |
| BXD09 | 1.771 | 1.768 |
| CAST | -0.594 | -1.597 |
| CCcont | 0.248 | 2.453 |
| DS01 | -1.632 | -1.637 |
| DS02 | -1.306 | -1.793 |
| DS04 | -0.136 | -0.732 |
| DS0c | -1.194 | -1.251 |
| GP01 | 1.134 | 0.061 |
| GP02 | 0.251 | -0.81 |
| GP0c | 1.595 | -0.273 |
| NOD | -1.128 | -1.557 |
| NZO | 0.23 | -1.263 |
| PWK | -0.469 | -0.337 |
| H37Rv_KO_CtpC | -0.578 | -0.162 |
| H37Rv_KO_CtpD | 0.006 | 0.769 |
| H37Rv_KO_Rv1272 | 1.298 | 2.336 |
| H37Rv_KO_SugABC | 0.836 | 1.588 |
| H37Rv_KO_MbtN | 2.209 | 3.349 |
| Trans05 | 1.733 | 2.419 |
| macrophage_unactivated | -2.061 | 0.634 |
| IL1 | -0.163 | -0.869 |
| Rapamycin | -0.915 | -0.052 |
| Tcell | 0.29 | 0.414 |
| GMCSF | -1.428 | -0.465 |
| IFNab | 0.115 | 1.403 |
| IFNg | -0.901 | -0.73 |
| IFNg_GMCSF1 | -1.024 | 0.446 |
| Rv1432_day32 | 0.846 | 0.541 |
| Rv1565c_day32 | -1.439 | -0.573 |
| secA2_input | 0.227 | 2.094 |
| delta_Rv3594 | 0.858 | 1.869 |
| delta_Rv3717 | 2.129 | 2.308 |
| delta_Rv3811 | 1.103 | 1.487 |
| delta_Rv0954 | -0.291 | -0.448 |
| PonA1 | -0.995 | -3.026 |
| EccD1_KO | 0.22 | 0.168 |
| EspI_KO | 0.088 | -0.177 |
| PE35_KO | -0.715 | -0.484 |
| PPE68_KO | 0.016 | -0.752 |
| glycerol2 | -0.206 | -2.685 |
| lignocerate | -2.133 | -2.415 |
| oleate | 2.606 | 0.189 |
| phosphatidylcholine | -1.732 | -3.088 |
| acetate | -0.073 | -0.495 |
| glucAc | -0.255 | -1.07 |
| Rv0950ko | -0.633 | -2.243 |
| Rv1096ko | -0.305 | -1.122 |
| Rv3684ko | 0.308 | -1.772 |
| delta_otsA_trehalose | -0.053 | -1.197 |