Top 10 genes with highest correlation to Rv1336/cysM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1334/mec | (cc=0.8246) | info on Rv1334/mec |
| Rv1337/- | (cc=0.8102) | info on Rv1337/- |
| Rv1335/cysO | (cc=0.7759) | info on Rv1335/cysO |
| Rv1333/- | (cc=0.7626) | info on Rv1333/- |
| Rv3842c/glpQ1 | (cc=0.7007) | info on Rv3842c/glpQ1 |
| Rv0047c/- | (cc=0.6919) | info on Rv0047c/- |
| Rv0153c/ptbB | (cc=0.6712) | info on Rv0153c/ptbB |
| Rv0644c/mmaA2 | (cc=0.6637) | info on Rv0644c/mmaA2 |
| Rv0645c/mmaA1 | (cc=0.6501) | info on Rv0645c/mmaA1 |
| Rv1640c/lysX | (cc=0.6454) | info on Rv1640c/lysX |
Correlation of Rv1336/cysM with Rv1335/cysO
Normalized LFCs for Rv1336/cysM:
(description and provenance of datasets)
| Rv1336/cysM | Rv1335/cysO | |
| Fe_supp_jason_reseq | 0.199 | -0.205 |
| low_pH_jason_reseq | 0.831 | 1.85 |
| NO_jason_reseq | 1.113 | 1.273 |
| B6_jason_reseq | 0.705 | 1.058 |
| MHCII_jason_reseq | -0.079 | -0.572 |
| Isoniazid02 | 1.385 | -0.207 |
| Rifampicin4 | 0.076 | 1.145 |
| Ethambutol3 | -0.593 | -1.267 |
| Meropenem3 | 0.628 | -0.089 |
| Vancomycin16 | 0.666 | 0.377 |
| Rv2680_day32 | 0.675 | -0.382 |
| H37Rv_KO_MarP | -0.425 | -0.628 |
| hypoxia_3wks | 2.213 | 1.547 |
| hypoxia_6wks | 4.042 | 2.76 |
| glycerol | -0.967 | -1.404 |
| cholesterol | 0.048 | -1.103 |
| AJ | -1.56 | -0.819 |
| Bibs02 | -1.444 | -0.375 |
| Bibs02c | -1.203 | 1.058 |
| BL6 | 1.43 | 1.805 |
| BL6a | 1.05 | 1.578 |
| BXD01 | 2.221 | 1.794 |
| BXD010 | 1.974 | 2.143 |
| BXD011 | 3.102 | 2.581 |
| BXD03 | 1.156 | 1.328 |
| BXD04 | 1.994 | 1.063 |
| BXD05 | 1.724 | 2.237 |
| BXD06 | 2.328 | 1.975 |
| BXD07 | 2.6 | 1.892 |
| BXD08 | 2.71 | 1.74 |
| BXD09 | 1.771 | 1.611 |
| CAST | -0.594 | -1.974 |
| CCcont | 0.248 | 0.075 |
| DS01 | -1.632 | -0.809 |
| DS02 | -1.306 | -1.09 |
| DS04 | -0.136 | 0.655 |
| DS0c | -1.194 | -0.754 |
| GP01 | 1.134 | 1.708 |
| GP02 | 0.251 | 3.674 |
| GP0c | 1.595 | 1.509 |
| NOD | -1.128 | -0.605 |
| NZO | 0.23 | 1.053 |
| PWK | -0.469 | -1.204 |
| H37Rv_KO_CtpC | -0.578 | 0.487 |
| H37Rv_KO_CtpD | 0.006 | 1.144 |
| H37Rv_KO_Rv1272 | 1.298 | 1.102 |
| H37Rv_KO_SugABC | 0.836 | 2.017 |
| H37Rv_KO_MbtN | 2.209 | 1.675 |
| Trans05 | 1.733 | 1.853 |
| macrophage_unactivated | -2.061 | -1.016 |
| IL1 | -0.163 | -0.448 |
| Rapamycin | -0.915 | 0.114 |
| Tcell | 0.29 | -0.329 |
| GMCSF | -1.428 | -1.803 |
| IFNab | 0.115 | -0.272 |
| IFNg | -0.901 | -0.275 |
| IFNg_GMCSF1 | -1.024 | -0.867 |
| Rv1432_day32 | 0.846 | 1.035 |
| Rv1565c_day32 | -1.439 | -1.854 |
| secA2_input | 0.227 | -1.025 |
| delta_Rv3594 | 0.858 | -0.289 |
| delta_Rv3717 | 2.129 | 1.003 |
| delta_Rv3811 | 1.103 | -0.083 |
| delta_Rv0954 | -0.291 | -1.016 |
| PonA1 | -0.995 | -1.772 |
| EccD1_KO | 0.22 | -0.924 |
| EspI_KO | 0.088 | 0.108 |
| PE35_KO | -0.715 | -1.68 |
| PPE68_KO | 0.016 | -1.459 |
| glycerol2 | -0.206 | -0.37 |
| lignocerate | -2.133 | -1.583 |
| oleate | 2.606 | 2.205 |
| phosphatidylcholine | -1.732 | -0.919 |
| acetate | -0.073 | 0.165 |
| glucAc | -0.255 | -0.703 |
| Rv0950ko | -0.633 | -0.163 |
| Rv1096ko | -0.305 | -0.787 |
| Rv3684ko | 0.308 | -0.233 |
| delta_otsA_trehalose | -0.053 | 1.062 |