Top 10 genes with highest correlation to Rv1314c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1493/mutB | (cc=0.7811) | info on Rv1493/mutB |
| Rv1492/mutA | (cc=0.7008) | info on Rv1492/mutA |
| Rv0256c/PPE2 | (cc=0.6909) | info on Rv0256c/PPE2 |
| Rv3551/- | (cc=0.6908) | info on Rv3551/- |
| Rv1819c/bacA | (cc=0.6889) | info on Rv1819c/bacA |
| Rv3614c/espD | (cc=0.687) | info on Rv3614c/espD |
| Rv1589/bioB | (cc=0.6806) | info on Rv1589/bioB |
| Rv2604c/snoP | (cc=0.6787) | info on Rv2604c/snoP |
| Rv2498c/citE | (cc=0.6736) | info on Rv2498c/citE |
| Rv3616c/espA | (cc=0.6725) | info on Rv3616c/espA |
Correlation of Rv1314c/- with Rv3616c/espA
Normalized LFCs for Rv1314c/-:
(description and provenance of datasets)
| Rv1314c/- | Rv3616c/espA | |
| Fe_supp_jason_reseq | 0.893 | 0.087 |
| low_pH_jason_reseq | -0.714 | -0.775 |
| NO_jason_reseq | -1.46 | -1.278 |
| B6_jason_reseq | -2.233 | -3.09 |
| MHCII_jason_reseq | -0.72 | -2.722 |
| Isoniazid02 | -0.22 | 0.476 |
| Rifampicin4 | -0.409 | 0.241 |
| Ethambutol3 | 0.013 | -0.018 |
| Meropenem3 | 0.722 | 0.789 |
| Vancomycin16 | 0.0 | -0.18 |
| Rv2680_day32 | -0.375 | -1.717 |
| H37Rv_KO_MarP | 1.202 | 0.381 |
| hypoxia_3wks | -0.347 | 0.024 |
| hypoxia_6wks | -1.453 | -0.098 |
| glycerol | 0.048 | -1.435 |
| cholesterol | 0.371 | -1.373 |
| AJ | -3.027 | -4.551 |
| Bibs02 | -1.379 | -4.346 |
| Bibs02c | -2.092 | -4.142 |
| BL6 | -0.931 | -3.453 |
| BL6a | -1.766 | -4.605 |
| BXD01 | -0.426 | -3.648 |
| BXD010 | -0.543 | -2.883 |
| BXD011 | -0.512 | -2.961 |
| BXD03 | -1.146 | -3.143 |
| BXD04 | -0.907 | -3.155 |
| BXD05 | -0.962 | -2.17 |
| BXD06 | -0.73 | -3.908 |
| BXD07 | -1.003 | -3.771 |
| BXD08 | -0.409 | -3.672 |
| BXD09 | -0.875 | -4.181 |
| CAST | -2.891 | -5.474 |
| CCcont | 0.277 | -1.136 |
| DS01 | -1.851 | -6.0 |
| DS02 | -3.723 | -5.764 |
| DS04 | -1.226 | -3.671 |
| DS0c | -0.781 | -5.466 |
| GP01 | -0.132 | -3.404 |
| GP02 | -0.371 | -2.752 |
| GP0c | -0.468 | -1.597 |
| NOD | -1.832 | -1.995 |
| NZO | -2.045 | -5.358 |
| PWK | -1.961 | -5.836 |
| H37Rv_KO_CtpC | -1.644 | -2.684 |
| H37Rv_KO_CtpD | -0.942 | -2.791 |
| H37Rv_KO_Rv1272 | -1.427 | -1.864 |
| H37Rv_KO_SugABC | -0.652 | -1.092 |
| H37Rv_KO_MbtN | -1.79 | 0.118 |
| Trans05 | -1.661 | -1.933 |
| macrophage_unactivated | 1.916 | -0.079 |
| IL1 | 0.0 | 1.35 |
| Rapamycin | 0.083 | -0.037 |
| Tcell | 1.965 | -0.841 |
| GMCSF | -0.356 | 2.094 |
| IFNab | 0.299 | 1.321 |
| IFNg | 0.331 | -1.109 |
| IFNg_GMCSF1 | -0.198 | -0.628 |
| Rv1432_day32 | 0.834 | -2.926 |
| Rv1565c_day32 | -1.478 | -3.852 |
| secA2_input | -0.013 | -0.211 |
| delta_Rv3594 | -0.136 | 0.101 |
| delta_Rv3717 | 0.646 | -0.448 |
| delta_Rv3811 | 1.087 | -0.094 |
| delta_Rv0954 | -0.37 | -1.009 |
| PonA1 | -0.33 | -1.103 |
| EccD1_KO | 1.569 | 0.135 |
| EspI_KO | 1.62 | 0.342 |
| PE35_KO | 1.219 | -0.502 |
| PPE68_KO | 1.616 | -0.618 |
| glycerol2 | 0.474 | 2.046 |
| lignocerate | 0.177 | 0.645 |
| oleate | 0.357 | 0.305 |
| phosphatidylcholine | 0.525 | 1.689 |
| acetate | -0.11 | -0.362 |
| glucAc | -0.174 | -0.715 |
| Rv0950ko | -0.567 | 0.326 |
| Rv1096ko | -0.332 | -0.199 |
| Rv3684ko | 0.0 | 0.174 |
| delta_otsA_trehalose | -0.198 | -0.88 |