Top 10 genes with highest correlation to Rv1314c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1493/mutB | (cc=0.7811) | info on Rv1493/mutB |
| Rv1492/mutA | (cc=0.7008) | info on Rv1492/mutA |
| Rv0256c/PPE2 | (cc=0.6909) | info on Rv0256c/PPE2 |
| Rv3551/- | (cc=0.6908) | info on Rv3551/- |
| Rv1819c/bacA | (cc=0.6889) | info on Rv1819c/bacA |
| Rv3614c/espD | (cc=0.687) | info on Rv3614c/espD |
| Rv1589/bioB | (cc=0.6806) | info on Rv1589/bioB |
| Rv2604c/snoP | (cc=0.6787) | info on Rv2604c/snoP |
| Rv2498c/citE | (cc=0.6736) | info on Rv2498c/citE |
| Rv3616c/espA | (cc=0.6725) | info on Rv3616c/espA |
Correlation of Rv1314c/- with Rv2498c/citE
Normalized LFCs for Rv1314c/-:
(description and provenance of datasets)
| Rv1314c/- | Rv2498c/citE | |
| Fe_supp_jason_reseq | 0.893 | 0.911 |
| low_pH_jason_reseq | -0.714 | 0.0 |
| NO_jason_reseq | -1.46 | -0.126 |
| B6_jason_reseq | -2.233 | -2.356 |
| MHCII_jason_reseq | -0.72 | -1.001 |
| Isoniazid02 | -0.22 | 0.739 |
| Rifampicin4 | -0.409 | -0.187 |
| Ethambutol3 | 0.013 | 0.302 |
| Meropenem3 | 0.722 | 0.49 |
| Vancomycin16 | 0.0 | 0.708 |
| Rv2680_day32 | -0.375 | -2.687 |
| H37Rv_KO_MarP | 1.202 | 0.395 |
| hypoxia_3wks | -0.347 | 0.231 |
| hypoxia_6wks | -1.453 | -0.424 |
| glycerol | 0.048 | 0.385 |
| cholesterol | 0.371 | 0.171 |
| AJ | -3.027 | -2.973 |
| Bibs02 | -1.379 | -0.699 |
| Bibs02c | -2.092 | -3.378 |
| BL6 | -0.931 | -1.795 |
| BL6a | -1.766 | -2.538 |
| BXD01 | -0.426 | -1.038 |
| BXD010 | -0.543 | 0.018 |
| BXD011 | -0.512 | -1.093 |
| BXD03 | -1.146 | -0.924 |
| BXD04 | -0.907 | -0.071 |
| BXD05 | -0.962 | -2.087 |
| BXD06 | -0.73 | -1.188 |
| BXD07 | -1.003 | -1.233 |
| BXD08 | -0.409 | -1.228 |
| BXD09 | -0.875 | -1.501 |
| CAST | -2.891 | -3.065 |
| CCcont | 0.277 | 0.021 |
| DS01 | -1.851 | -1.432 |
| DS02 | -3.723 | -1.545 |
| DS04 | -1.226 | -1.727 |
| DS0c | -0.781 | -2.401 |
| GP01 | -0.132 | -0.482 |
| GP02 | -0.371 | -1.524 |
| GP0c | -0.468 | -0.094 |
| NOD | -1.832 | -1.476 |
| NZO | -2.045 | -2.464 |
| PWK | -1.961 | -2.514 |
| H37Rv_KO_CtpC | -1.644 | -1.446 |
| H37Rv_KO_CtpD | -0.942 | -0.537 |
| H37Rv_KO_Rv1272 | -1.427 | -2.583 |
| H37Rv_KO_SugABC | -0.652 | -0.789 |
| H37Rv_KO_MbtN | -1.79 | -0.821 |
| Trans05 | -1.661 | -2.503 |
| macrophage_unactivated | 1.916 | 0.928 |
| IL1 | 0.0 | 1.145 |
| Rapamycin | 0.083 | 0.902 |
| Tcell | 1.965 | 1.372 |
| GMCSF | -0.356 | 0.826 |
| IFNab | 0.299 | 1.769 |
| IFNg | 0.331 | 0.241 |
| IFNg_GMCSF1 | -0.198 | 0.484 |
| Rv1432_day32 | 0.834 | -2.117 |
| Rv1565c_day32 | -1.478 | -2.924 |
| secA2_input | -0.013 | -0.632 |
| delta_Rv3594 | -0.136 | 0.026 |
| delta_Rv3717 | 0.646 | 0.083 |
| delta_Rv3811 | 1.087 | 0.845 |
| delta_Rv0954 | -0.37 | 0.394 |
| PonA1 | -0.33 | 0.185 |
| EccD1_KO | 1.569 | 1.398 |
| EspI_KO | 1.62 | 1.3 |
| PE35_KO | 1.219 | 1.286 |
| PPE68_KO | 1.616 | 1.312 |
| glycerol2 | 0.474 | -0.932 |
| lignocerate | 0.177 | -1.34 |
| oleate | 0.357 | 0.839 |
| phosphatidylcholine | 0.525 | -0.095 |
| acetate | -0.11 | -1.578 |
| glucAc | -0.174 | -2.06 |
| Rv0950ko | -0.567 | 0.416 |
| Rv1096ko | -0.332 | 1.197 |
| Rv3684ko | 0.0 | 0.593 |
| delta_otsA_trehalose | -0.198 | -4.686 |