Top 10 genes with highest correlation to Rv1244/lpqZ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1747/- | (cc=0.6006) | info on Rv1747/- |
| Rv3484/cpsA | (cc=0.5645) | info on Rv3484/cpsA |
| Rv3779/- | (cc=0.5615) | info on Rv3779/- |
| Rv3908/mutT4 | (cc=0.5428) | info on Rv3908/mutT4 |
| Rv0129c/fbpC | (cc=0.5008) | info on Rv0129c/fbpC |
| Rv0037c/- | (cc=0.4924) | info on Rv0037c/- |
| Rv3630/- | (cc=0.4909) | info on Rv3630/- |
| Rv2197c/- | (cc=0.4907) | info on Rv2197c/- |
| Rv3632/- | (cc=0.4904) | info on Rv3632/- |
| Rv1111c/- | (cc=0.4781) | info on Rv1111c/- |
Correlation of Rv1244/lpqZ with Rv3908/mutT4
Normalized LFCs for Rv1244/lpqZ:
(description and provenance of datasets)
| Rv1244/lpqZ | Rv3908/mutT4 | |
| Fe_supp_jason_reseq | -1.489 | 0.974 |
| low_pH_jason_reseq | -0.269 | -1.517 |
| NO_jason_reseq | 3.568 | 1.334 |
| B6_jason_reseq | 0.722 | 2.228 |
| MHCII_jason_reseq | -0.935 | 1.939 |
| Isoniazid02 | 0.988 | 0.0 |
| Rifampicin4 | -6.0 | -2.323 |
| Ethambutol3 | 1.135 | -0.652 |
| Meropenem3 | -3.11 | -0.924 |
| Vancomycin16 | -6.0 | -1.825 |
| Rv2680_day32 | -0.398 | 1.681 |
| H37Rv_KO_MarP | -3.509 | -0.128 |
| hypoxia_3wks | 4.466 | 2.404 |
| hypoxia_6wks | 3.974 | 3.18 |
| glycerol | -1.463 | -0.405 |
| cholesterol | -0.11 | 0.803 |
| AJ | -3.277 | -2.361 |
| Bibs02 | -1.449 | -1.04 |
| Bibs02c | -2.011 | -1.087 |
| BL6 | -0.672 | -0.455 |
| BL6a | -1.68 | -1.798 |
| BXD01 | -1.955 | -1.734 |
| BXD010 | 0.345 | -3.111 |
| BXD011 | -0.331 | -1.481 |
| BXD03 | 0.072 | -1.376 |
| BXD04 | -0.374 | -1.584 |
| BXD05 | -0.258 | -0.765 |
| BXD06 | 0.024 | -0.233 |
| BXD07 | -1.641 | -2.309 |
| BXD08 | -1.406 | -2.481 |
| BXD09 | -1.529 | -1.665 |
| CAST | -2.603 | -2.836 |
| CCcont | -0.622 | -1.671 |
| DS01 | -3.145 | -2.746 |
| DS02 | -2.213 | -1.624 |
| DS04 | -2.051 | -2.344 |
| DS0c | -2.336 | -1.587 |
| GP01 | -0.029 | -1.8 |
| GP02 | -1.343 | -0.785 |
| GP0c | 0.642 | -0.284 |
| NOD | -0.792 | -2.612 |
| NZO | -1.725 | -1.81 |
| PWK | -0.774 | 0.205 |
| H37Rv_KO_CtpC | -2.041 | -1.653 |
| H37Rv_KO_CtpD | -1.128 | -3.174 |
| H37Rv_KO_Rv1272 | -1.129 | -0.951 |
| H37Rv_KO_SugABC | -2.267 | 0.456 |
| H37Rv_KO_MbtN | 2.575 | 0.404 |
| Trans05 | 1.216 | 0.145 |
| macrophage_unactivated | -1.079 | 0.076 |
| IL1 | -0.012 | 0.955 |
| Rapamycin | -0.746 | 0.215 |
| Tcell | 0.401 | -0.078 |
| GMCSF | -1.529 | 0.246 |
| IFNab | 0.163 | -0.707 |
| IFNg | -0.914 | -1.195 |
| IFNg_GMCSF1 | -1.838 | -0.075 |
| Rv1432_day32 | 0.533 | 0.0 |
| Rv1565c_day32 | 0.218 | -0.351 |
| secA2_input | -1.506 | -0.538 |
| delta_Rv3594 | 0.878 | 1.797 |
| delta_Rv3717 | 1.368 | 3.121 |
| delta_Rv3811 | 0.628 | 2.678 |
| delta_Rv0954 | 0.008 | 0.695 |
| PonA1 | -2.361 | -1.101 |
| EccD1_KO | 1.253 | 0.76 |
| EspI_KO | 0.645 | -0.277 |
| PE35_KO | -0.245 | -0.283 |
| PPE68_KO | -0.237 | 1.069 |
| glycerol2 | -1.033 | 0.902 |
| lignocerate | -1.019 | 2.322 |
| oleate | -1.045 | -0.961 |
| phosphatidylcholine | -1.852 | 0.347 |
| acetate | -0.306 | 3.004 |
| glucAc | -0.575 | 2.09 |
| Rv0950ko | -1.948 | 0.482 |
| Rv1096ko | 0.416 | 1.315 |
| Rv3684ko | 0.848 | 0.269 |
| delta_otsA_trehalose | 0.449 | -0.768 |