Top 10 genes with highest correlation to Rv1244/lpqZ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1747/- | (cc=0.6006) | info on Rv1747/- |
| Rv3484/cpsA | (cc=0.5645) | info on Rv3484/cpsA |
| Rv3779/- | (cc=0.5615) | info on Rv3779/- |
| Rv3908/mutT4 | (cc=0.5428) | info on Rv3908/mutT4 |
| Rv0129c/fbpC | (cc=0.5008) | info on Rv0129c/fbpC |
| Rv0037c/- | (cc=0.4924) | info on Rv0037c/- |
| Rv3630/- | (cc=0.4909) | info on Rv3630/- |
| Rv2197c/- | (cc=0.4907) | info on Rv2197c/- |
| Rv3632/- | (cc=0.4904) | info on Rv3632/- |
| Rv1111c/- | (cc=0.4781) | info on Rv1111c/- |
Correlation of Rv1244/lpqZ with Rv3630/-
Normalized LFCs for Rv1244/lpqZ:
(description and provenance of datasets)
| Rv1244/lpqZ | Rv3630/- | |
| Fe_supp_jason_reseq | -1.489 | 1.13 |
| low_pH_jason_reseq | -0.269 | 1.24 |
| NO_jason_reseq | 3.568 | -0.281 |
| B6_jason_reseq | 0.722 | 1.003 |
| MHCII_jason_reseq | -0.935 | 0.688 |
| Isoniazid02 | 0.988 | -0.585 |
| Rifampicin4 | -6.0 | -3.303 |
| Ethambutol3 | 1.135 | -2.29 |
| Meropenem3 | -3.11 | -1.112 |
| Vancomycin16 | -6.0 | -5.889 |
| Rv2680_day32 | -0.398 | 0.595 |
| H37Rv_KO_MarP | -3.509 | -4.923 |
| hypoxia_3wks | 4.466 | 0.51 |
| hypoxia_6wks | 3.974 | 1.424 |
| glycerol | -1.463 | -0.926 |
| cholesterol | -0.11 | -0.186 |
| AJ | -3.277 | -0.208 |
| Bibs02 | -1.449 | -0.384 |
| Bibs02c | -2.011 | -0.17 |
| BL6 | -0.672 | -0.186 |
| BL6a | -1.68 | 0.0 |
| BXD01 | -1.955 | -0.045 |
| BXD010 | 0.345 | -0.411 |
| BXD011 | -0.331 | 0.222 |
| BXD03 | 0.072 | -0.403 |
| BXD04 | -0.374 | -0.272 |
| BXD05 | -0.258 | -0.035 |
| BXD06 | 0.024 | -0.211 |
| BXD07 | -1.641 | -0.335 |
| BXD08 | -1.406 | 0.448 |
| BXD09 | -1.529 | 0.172 |
| CAST | -2.603 | -0.712 |
| CCcont | -0.622 | -0.345 |
| DS01 | -3.145 | -0.021 |
| DS02 | -2.213 | 0.164 |
| DS04 | -2.051 | 0.082 |
| DS0c | -2.336 | 0.676 |
| GP01 | -0.029 | 0.449 |
| GP02 | -1.343 | -0.083 |
| GP0c | 0.642 | -0.315 |
| NOD | -0.792 | -1.285 |
| NZO | -1.725 | -0.256 |
| PWK | -0.774 | -0.701 |
| H37Rv_KO_CtpC | -2.041 | -0.324 |
| H37Rv_KO_CtpD | -1.128 | 0.791 |
| H37Rv_KO_Rv1272 | -1.129 | -0.251 |
| H37Rv_KO_SugABC | -2.267 | 0.434 |
| H37Rv_KO_MbtN | 2.575 | 0.287 |
| Trans05 | 1.216 | -0.33 |
| macrophage_unactivated | -1.079 | -0.401 |
| IL1 | -0.012 | 0.219 |
| Rapamycin | -0.746 | 0.442 |
| Tcell | 0.401 | -0.202 |
| GMCSF | -1.529 | 0.0 |
| IFNab | 0.163 | 0.136 |
| IFNg | -0.914 | -0.04 |
| IFNg_GMCSF1 | -1.838 | 0.54 |
| Rv1432_day32 | 0.533 | 1.246 |
| Rv1565c_day32 | 0.218 | 1.061 |
| secA2_input | -1.506 | -0.809 |
| delta_Rv3594 | 0.878 | 0.875 |
| delta_Rv3717 | 1.368 | 1.545 |
| delta_Rv3811 | 0.628 | 1.438 |
| delta_Rv0954 | 0.008 | 0.098 |
| PonA1 | -2.361 | 0.841 |
| EccD1_KO | 1.253 | -0.98 |
| EspI_KO | 0.645 | -0.918 |
| PE35_KO | -0.245 | -0.636 |
| PPE68_KO | -0.237 | -0.733 |
| glycerol2 | -1.033 | -0.727 |
| lignocerate | -1.019 | -0.662 |
| oleate | -1.045 | -2.295 |
| phosphatidylcholine | -1.852 | -0.331 |
| acetate | -0.306 | 0.0 |
| glucAc | -0.575 | 0.1 |
| Rv0950ko | -1.948 | -0.989 |
| Rv1096ko | 0.416 | -0.467 |
| Rv3684ko | 0.848 | 0.567 |
| delta_otsA_trehalose | 0.449 | 1.691 |