Top 10 genes with highest correlation to Rv1244/lpqZ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1747/- | (cc=0.6006) | info on Rv1747/- |
| Rv3484/cpsA | (cc=0.5645) | info on Rv3484/cpsA |
| Rv3779/- | (cc=0.5615) | info on Rv3779/- |
| Rv3908/mutT4 | (cc=0.5428) | info on Rv3908/mutT4 |
| Rv0129c/fbpC | (cc=0.5008) | info on Rv0129c/fbpC |
| Rv0037c/- | (cc=0.4924) | info on Rv0037c/- |
| Rv3630/- | (cc=0.4909) | info on Rv3630/- |
| Rv2197c/- | (cc=0.4907) | info on Rv2197c/- |
| Rv3632/- | (cc=0.4904) | info on Rv3632/- |
| Rv1111c/- | (cc=0.4781) | info on Rv1111c/- |
Correlation of Rv1244/lpqZ with Rv3632/-
Normalized LFCs for Rv1244/lpqZ:
(description and provenance of datasets)
| Rv1244/lpqZ | Rv3632/- | |
| Fe_supp_jason_reseq | -1.489 | -0.483 |
| low_pH_jason_reseq | -0.269 | 0.577 |
| NO_jason_reseq | 3.568 | 1.137 |
| B6_jason_reseq | 0.722 | 0.367 |
| MHCII_jason_reseq | -0.935 | -2.782 |
| Isoniazid02 | 0.988 | -0.033 |
| Rifampicin4 | -6.0 | -0.347 |
| Ethambutol3 | 1.135 | -2.416 |
| Meropenem3 | -3.11 | -1.654 |
| Vancomycin16 | -6.0 | -6.0 |
| Rv2680_day32 | -0.398 | -0.883 |
| H37Rv_KO_MarP | -3.509 | -0.521 |
| hypoxia_3wks | 4.466 | 2.967 |
| hypoxia_6wks | 3.974 | 2.873 |
| glycerol | -1.463 | -1.058 |
| cholesterol | -0.11 | -1.491 |
| AJ | -3.277 | -1.215 |
| Bibs02 | -1.449 | -2.662 |
| Bibs02c | -2.011 | -2.514 |
| BL6 | -0.672 | -2.497 |
| BL6a | -1.68 | -2.307 |
| BXD01 | -1.955 | -0.898 |
| BXD010 | 0.345 | -1.178 |
| BXD011 | -0.331 | -1.493 |
| BXD03 | 0.072 | -1.349 |
| BXD04 | -0.374 | -0.549 |
| BXD05 | -0.258 | -1.277 |
| BXD06 | 0.024 | -0.752 |
| BXD07 | -1.641 | -1.407 |
| BXD08 | -1.406 | -0.444 |
| BXD09 | -1.529 | -1.679 |
| CAST | -2.603 | -0.973 |
| CCcont | -0.622 | -0.753 |
| DS01 | -3.145 | -3.858 |
| DS02 | -2.213 | -1.731 |
| DS04 | -2.051 | -3.611 |
| DS0c | -2.336 | -1.661 |
| GP01 | -0.029 | -0.771 |
| GP02 | -1.343 | -1.536 |
| GP0c | 0.642 | -0.897 |
| NOD | -0.792 | 0.742 |
| NZO | -1.725 | -0.236 |
| PWK | -0.774 | -0.655 |
| H37Rv_KO_CtpC | -2.041 | -1.703 |
| H37Rv_KO_CtpD | -1.128 | -2.702 |
| H37Rv_KO_Rv1272 | -1.129 | -0.896 |
| H37Rv_KO_SugABC | -2.267 | -2.561 |
| H37Rv_KO_MbtN | 2.575 | -1.794 |
| Trans05 | 1.216 | -0.529 |
| macrophage_unactivated | -1.079 | 0.492 |
| IL1 | -0.012 | 1.548 |
| Rapamycin | -0.746 | 0.172 |
| Tcell | 0.401 | 0.746 |
| GMCSF | -1.529 | 0.605 |
| IFNab | 0.163 | -1.11 |
| IFNg | -0.914 | -0.318 |
| IFNg_GMCSF1 | -1.838 | -0.182 |
| Rv1432_day32 | 0.533 | -1.501 |
| Rv1565c_day32 | 0.218 | -2.323 |
| secA2_input | -1.506 | 0.368 |
| delta_Rv3594 | 0.878 | -0.831 |
| delta_Rv3717 | 1.368 | -1.148 |
| delta_Rv3811 | 0.628 | -1.06 |
| delta_Rv0954 | 0.008 | 0.11 |
| PonA1 | -2.361 | -0.184 |
| EccD1_KO | 1.253 | -0.921 |
| EspI_KO | 0.645 | -1.631 |
| PE35_KO | -0.245 | -1.657 |
| PPE68_KO | -0.237 | -1.053 |
| glycerol2 | -1.033 | 0.301 |
| lignocerate | -1.019 | -2.999 |
| oleate | -1.045 | -0.777 |
| phosphatidylcholine | -1.852 | -1.41 |
| acetate | -0.306 | -0.088 |
| glucAc | -0.575 | -0.337 |
| Rv0950ko | -1.948 | 0.479 |
| Rv1096ko | 0.416 | 0.621 |
| Rv3684ko | 0.848 | 1.012 |
| delta_otsA_trehalose | 0.449 | -1.207 |