Top 10 genes with highest correlation to Rv1234/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0983/pepD | (cc=0.5123) | info on Rv0983/pepD |
| Rv3569c/hsaD | (cc=0.511) | info on Rv3569c/hsaD |
| Rv1235/lpqY | (cc=0.5003) | info on Rv1235/lpqY |
| Rv0099/fadD10 | (cc=0.4945) | info on Rv0099/fadD10 |
| Rv3560c/fadE30 | (cc=0.4889) | info on Rv3560c/fadE30 |
| Rv2498c/citE | (cc=0.4822) | info on Rv2498c/citE |
| Rv3543c/fadE29 | (cc=0.4814) | info on Rv3543c/fadE29 |
| Rv0204c/- | (cc=0.474) | info on Rv0204c/- |
| Rv2734/- | (cc=0.4704) | info on Rv2734/- |
| Rv1417/- | (cc=0.4675) | info on Rv1417/- |
Correlation of Rv1234/- with Rv3569c/hsaD
Normalized LFCs for Rv1234/-:
(description and provenance of datasets)
| Rv1234/- | Rv3569c/hsaD | |
| Fe_supp_jason_reseq | -0.83 | -0.477 |
| low_pH_jason_reseq | 0.085 | 1.357 |
| NO_jason_reseq | 0.425 | -0.62 |
| B6_jason_reseq | -1.557 | -2.249 |
| MHCII_jason_reseq | -1.173 | -1.981 |
| Isoniazid02 | -1.133 | -1.455 |
| Rifampicin4 | -0.615 | 0.393 |
| Ethambutol3 | 0.134 | 0.066 |
| Meropenem3 | -1.329 | -1.166 |
| Vancomycin16 | -1.143 | -0.47 |
| Rv2680_day32 | -0.117 | -1.711 |
| H37Rv_KO_MarP | 0.488 | -0.326 |
| hypoxia_3wks | -1.878 | 0.873 |
| hypoxia_6wks | -1.349 | 0.572 |
| glycerol | -0.288 | 0.0 |
| cholesterol | 1.031 | -2.687 |
| AJ | -1.98 | -3.667 |
| Bibs02 | 0.522 | -3.209 |
| Bibs02c | -2.884 | -1.791 |
| BL6 | -1.376 | -1.414 |
| BL6a | -0.926 | -2.576 |
| BXD01 | -0.15 | -1.694 |
| BXD010 | -0.726 | -1.925 |
| BXD011 | 0.433 | -1.254 |
| BXD03 | -1.746 | -1.678 |
| BXD04 | 0.22 | -0.535 |
| BXD05 | -0.017 | -2.023 |
| BXD06 | -0.843 | -1.911 |
| BXD07 | 0.969 | -1.078 |
| BXD08 | 0.196 | -1.139 |
| BXD09 | 0.083 | -1.664 |
| CAST | -0.394 | -3.64 |
| CCcont | -0.132 | 0.078 |
| DS01 | -1.769 | -3.222 |
| DS02 | -0.468 | -2.347 |
| DS04 | -1.06 | -1.304 |
| DS0c | -1.912 | -2.135 |
| GP01 | 0.79 | -1.484 |
| GP02 | -0.833 | -1.544 |
| GP0c | 0.801 | -0.494 |
| NOD | -1.796 | -3.739 |
| NZO | -0.894 | -3.32 |
| PWK | -1.729 | -2.948 |
| H37Rv_KO_CtpC | 1.033 | -2.704 |
| H37Rv_KO_CtpD | -0.949 | -1.813 |
| H37Rv_KO_Rv1272 | 0.643 | 0.878 |
| H37Rv_KO_SugABC | 1.74 | 1.137 |
| H37Rv_KO_MbtN | -0.938 | -0.842 |
| Trans05 | 1.537 | 0.381 |
| macrophage_unactivated | 0.492 | -1.531 |
| IL1 | 1.934 | 1.127 |
| Rapamycin | 1.725 | 0.832 |
| Tcell | -0.42 | -3.183 |
| GMCSF | 2.339 | 0.613 |
| IFNab | 1.097 | 0.0 |
| IFNg | 3.375 | 0.406 |
| IFNg_GMCSF1 | 2.853 | 0.478 |
| Rv1432_day32 | -2.515 | -3.52 |
| Rv1565c_day32 | -2.132 | -2.257 |
| secA2_input | 1.057 | 2.151 |
| delta_Rv3594 | 0.052 | -0.327 |
| delta_Rv3717 | 0.147 | -0.031 |
| delta_Rv3811 | -0.134 | -0.153 |
| delta_Rv0954 | 1.39 | 0.269 |
| PonA1 | 0.343 | 0.313 |
| EccD1_KO | 1.289 | -1.658 |
| EspI_KO | 1.283 | -0.351 |
| PE35_KO | 0.551 | 0.201 |
| PPE68_KO | 0.899 | 0.0 |
| glycerol2 | -1.974 | -0.581 |
| lignocerate | -1.735 | -0.569 |
| oleate | -0.332 | -0.384 |
| phosphatidylcholine | -0.98 | -0.511 |
| acetate | -1.102 | -0.451 |
| glucAc | -2.014 | -0.624 |
| Rv0950ko | 0.908 | 0.232 |
| Rv1096ko | 0.371 | 0.305 |
| Rv3684ko | 1.831 | 0.413 |
| delta_otsA_trehalose | -0.058 | -0.965 |