Top 10 genes with highest correlation to Rv1234/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0983/pepD | (cc=0.5123) | info on Rv0983/pepD |
| Rv3569c/hsaD | (cc=0.511) | info on Rv3569c/hsaD |
| Rv1235/lpqY | (cc=0.5003) | info on Rv1235/lpqY |
| Rv0099/fadD10 | (cc=0.4945) | info on Rv0099/fadD10 |
| Rv3560c/fadE30 | (cc=0.4889) | info on Rv3560c/fadE30 |
| Rv2498c/citE | (cc=0.4822) | info on Rv2498c/citE |
| Rv3543c/fadE29 | (cc=0.4814) | info on Rv3543c/fadE29 |
| Rv0204c/- | (cc=0.474) | info on Rv0204c/- |
| Rv2734/- | (cc=0.4704) | info on Rv2734/- |
| Rv1417/- | (cc=0.4675) | info on Rv1417/- |
Correlation of Rv1234/- with Rv2498c/citE
Normalized LFCs for Rv1234/-:
(description and provenance of datasets)
| Rv1234/- | Rv2498c/citE | |
| Fe_supp_jason_reseq | -0.83 | 0.911 |
| low_pH_jason_reseq | 0.085 | 0.0 |
| NO_jason_reseq | 0.425 | -0.126 |
| B6_jason_reseq | -1.557 | -2.356 |
| MHCII_jason_reseq | -1.173 | -1.001 |
| Isoniazid02 | -1.133 | 0.739 |
| Rifampicin4 | -0.615 | -0.187 |
| Ethambutol3 | 0.134 | 0.302 |
| Meropenem3 | -1.329 | 0.49 |
| Vancomycin16 | -1.143 | 0.708 |
| Rv2680_day32 | -0.117 | -2.687 |
| H37Rv_KO_MarP | 0.488 | 0.395 |
| hypoxia_3wks | -1.878 | 0.231 |
| hypoxia_6wks | -1.349 | -0.424 |
| glycerol | -0.288 | 0.385 |
| cholesterol | 1.031 | 0.171 |
| AJ | -1.98 | -2.973 |
| Bibs02 | 0.522 | -0.699 |
| Bibs02c | -2.884 | -3.378 |
| BL6 | -1.376 | -1.795 |
| BL6a | -0.926 | -2.538 |
| BXD01 | -0.15 | -1.038 |
| BXD010 | -0.726 | 0.018 |
| BXD011 | 0.433 | -1.093 |
| BXD03 | -1.746 | -0.924 |
| BXD04 | 0.22 | -0.071 |
| BXD05 | -0.017 | -2.087 |
| BXD06 | -0.843 | -1.188 |
| BXD07 | 0.969 | -1.233 |
| BXD08 | 0.196 | -1.228 |
| BXD09 | 0.083 | -1.501 |
| CAST | -0.394 | -3.065 |
| CCcont | -0.132 | 0.021 |
| DS01 | -1.769 | -1.432 |
| DS02 | -0.468 | -1.545 |
| DS04 | -1.06 | -1.727 |
| DS0c | -1.912 | -2.401 |
| GP01 | 0.79 | -0.482 |
| GP02 | -0.833 | -1.524 |
| GP0c | 0.801 | -0.094 |
| NOD | -1.796 | -1.476 |
| NZO | -0.894 | -2.464 |
| PWK | -1.729 | -2.514 |
| H37Rv_KO_CtpC | 1.033 | -1.446 |
| H37Rv_KO_CtpD | -0.949 | -0.537 |
| H37Rv_KO_Rv1272 | 0.643 | -2.583 |
| H37Rv_KO_SugABC | 1.74 | -0.789 |
| H37Rv_KO_MbtN | -0.938 | -0.821 |
| Trans05 | 1.537 | -2.503 |
| macrophage_unactivated | 0.492 | 0.928 |
| IL1 | 1.934 | 1.145 |
| Rapamycin | 1.725 | 0.902 |
| Tcell | -0.42 | 1.372 |
| GMCSF | 2.339 | 0.826 |
| IFNab | 1.097 | 1.769 |
| IFNg | 3.375 | 0.241 |
| IFNg_GMCSF1 | 2.853 | 0.484 |
| Rv1432_day32 | -2.515 | -2.117 |
| Rv1565c_day32 | -2.132 | -2.924 |
| secA2_input | 1.057 | -0.632 |
| delta_Rv3594 | 0.052 | 0.026 |
| delta_Rv3717 | 0.147 | 0.083 |
| delta_Rv3811 | -0.134 | 0.845 |
| delta_Rv0954 | 1.39 | 0.394 |
| PonA1 | 0.343 | 0.185 |
| EccD1_KO | 1.289 | 1.398 |
| EspI_KO | 1.283 | 1.3 |
| PE35_KO | 0.551 | 1.286 |
| PPE68_KO | 0.899 | 1.312 |
| glycerol2 | -1.974 | -0.932 |
| lignocerate | -1.735 | -1.34 |
| oleate | -0.332 | 0.839 |
| phosphatidylcholine | -0.98 | -0.095 |
| acetate | -1.102 | -1.578 |
| glucAc | -2.014 | -2.06 |
| Rv0950ko | 0.908 | 0.416 |
| Rv1096ko | 0.371 | 1.197 |
| Rv3684ko | 1.831 | 0.593 |
| delta_otsA_trehalose | -0.058 | -4.686 |